| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1989 |
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| Symbol | |
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| ID | 4038795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2162059 |
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| End bp | 2163114 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637977373 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_584137 |
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| Protein GI | 94310927 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.931204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0511274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGA CCAGTAGCAC CCCACAAACC GAGTCCAGAG GCGGAAGCCA AGGAAATATC
AGGCCCCGTA GAATTTCTGT GGCGCCAATG ATGGACTGGA CTGACCGCCA TTGTCGGACG
TTTCACCGCG CCCTGAGTCA ACACACCTGG CTCTATACGG AGATGGTGAC GACTGGTGCG
CTGCTGCACG GCGATGTCGC GCGGCACCTC GATTTCAGTG CGGCGGAGCA ACCTGTGGCG
CTGCAGCTTG GCGGCAGCGA GCCGGTGGAC CTTGCCCAAG CGGCAAAACT GGGCGAGCAG
TGGGGCTACA AAGAGATCAA TCTGAACTGC GGTTGTCCGT CCGAGCGCGT GCAACGCGGT
GCGTTTGGTG CGTGCCTGAT GGCCGAACCA CAGCTTGTGG CCGATTGTGT GAGGGCCATG
CGCGATGTCG TGTCGGTGCC GGTGACGGTC AAGCACCGCA TTGGCATTGA TACGATCGAG
CACTACGGAT TTGTGCGTGA TTTTGTCGGC ACCATTGCGG AGGCCGGCTG TGACATATTC
ATCGTCCACG CGCGTAATGC GATTCTGAAG GGGCTGAGCC CAAAGGAGAA TCGCGAAATT
CCACCGCTGC GATATGAGGT CGCCTATGAA CTAAAGCGGG AATTTCCACA TCTGGAAATC
CTGATTAATG GTGGTGTTGT CTCGTACGGT GAAATAGACG AACACCTGAG GCACGTCGAC
GGCGTAATGA TCGGGCGTCA GGCTTATCAC GATCCCTATT TCCTCTCGGA AATGGATGCA
CGTTTCTATG GTGGGACTGC GCCTATCGTG ACGCGCGAAA TGGCCGAGCT GACGATGCAG
GCATATATTG GCGATCTCGT GGAGAAGGGT GGCTATATGG GGGCTGCAAC GCGCCATATG
CTTGGCCTCC ATCGCGGAAT CTATGGTGGC CGTGGTTGGC GTCGTGTGCT TTCCGATGCC
CGTCGAATGA ACGCAGCGCG CTCCCGAGCA GATGTGGATG CCCTGTTCGA GGAGGCGCGC
TCACACCTTC GTCCGGGGCT CCAGGAAGCG GCGTAA
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| Protein sequence | MEQTSSTPQT ESRGGSQGNI RPRRISVAPM MDWTDRHCRT FHRALSQHTW LYTEMVTTGA
LLHGDVARHL DFSAAEQPVA LQLGGSEPVD LAQAAKLGEQ WGYKEINLNC GCPSERVQRG
AFGACLMAEP QLVADCVRAM RDVVSVPVTV KHRIGIDTIE HYGFVRDFVG TIAEAGCDIF
IVHARNAILK GLSPKENREI PPLRYEVAYE LKREFPHLEI LINGGVVSYG EIDEHLRHVD
GVMIGRQAYH DPYFLSEMDA RFYGGTAPIV TREMAELTMQ AYIGDLVEKG GYMGAATRHM
LGLHRGIYGG RGWRRVLSDA RRMNAARSRA DVDALFEEAR SHLRPGLQEA A
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