Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1972 |
Symbol | |
ID | 4038777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2148462 |
End bp | 2149100 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637977355 |
Product | NLP/P60 |
Protein accession | YP_584120 |
Protein GI | 94310910 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.107958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.172208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAGC GCCCGTTTCA CTCACCCTCT CGCCGGCTTT CACTATCCGC ACTGTGCGCA GCGGCACTAC TGCTCGCCGC CTGCGCCGGC GGGCCGCCCG CACGTCAGGG CGCGTCGCTG CCCCGCACAC CGGGCAAGCC AATCGTCGAT CCCAGCGCCG GACTCGAGGA AGTCTCGATC CAGGCAATGT CCCTCGTCGG CACACCATAC CGCTACGGCG GAAACACGCC TGACTCCGGA TTCGATTGCA GCGGCCTGGT CCGTTACGTG GTCCAGCGCG CCGCCAGCGT CAACCTGCCA CGCACCACCG AGCAAATGGG ACAGCGTGGC ACGGCACTCG ATCGGCGCGA TGTCGCATCG GGCGATCTTG TCTTTTTCAA CACCACGGGA CGCGCCAACT CCCATGTCGG CATCTATGTC GGACAGAATC GCTTTGTCCA CGCCCCAGCC ACCGGTGGCA CCGTCCGGCT GGAAGACATG ACCAAGTCGT ACTGGGCGTC GCGCTACAAC GGCGCGCGGC GCGTCGTGGC CGCCGGCAGC CTCGATATGA CCCCGGTTCC CAGCCCAGTT CCGTCAGCCC CAATCACCCC ACCCGCCCCG GACGACGACG ATCCGATCGC CGCATTCGCG AACCGGTAA
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Protein sequence | MPQRPFHSPS RRLSLSALCA AALLLAACAG GPPARQGASL PRTPGKPIVD PSAGLEEVSI QAMSLVGTPY RYGGNTPDSG FDCSGLVRYV VQRAASVNLP RTTEQMGQRG TALDRRDVAS GDLVFFNTTG RANSHVGIYV GQNRFVHAPA TGGTVRLEDM TKSYWASRYN GARRVVAAGS LDMTPVPSPV PSAPITPPAP DDDDPIAAFA NR
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