| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1969 |
|---|
| Symbol | |
|---|
| ID | 4038774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 2145273 |
|---|
| End bp | 2145734 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637977352 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_584117 |
|---|
| Protein GI | 94310907 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.140675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.173806 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCA GTCTCAACAA GGCCATTCCC GACTTCCAGG CCCCCGCCAC CGGTGGGGAC
TTCCGTCTTG CCGACCAGCG CGGCAAGACC ACCGTGCTGT ACTTCTACCC GAAGGACAAC
ACGCCGGGTT GCACCACGGA GGCGATGAAC TTCCGCGATC AGTACGACGA TTTCGAGAAG
GCTGGCGCCG CGGTTTACGG CATCTCTCGC GACAGCATGA AGTCGCACGA GAACTTCAAG
GCCAAGCTGG AGTTGCCGTT CGAACTGATC TCGGACGCCG ACGAGGCGAT CTGCCAGCTC
TTCGATGTCA TCAAGATGAA AAAGATGTAT GGCAAGGACG TGCGCGGCAT CGAGCGCAGC
ACGTTCATCC TTGATGCCAA GGGTGTCCTG CGCCACGAAA TGCGCGGCAT CAAGGTGCCG
AATCACGTGG ACGAAGTGCT GGAGATCGTC AAGGGGATGT GA
|
|---|
| Protein sequence | MTVSLNKAIP DFQAPATGGD FRLADQRGKT TVLYFYPKDN TPGCTTEAMN FRDQYDDFEK
AGAAVYGISR DSMKSHENFK AKLELPFELI SDADEAICQL FDVIKMKKMY GKDVRGIERS
TFILDAKGVL RHEMRGIKVP NHVDEVLEIV KGM
|
|---|
| |