| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1956 |
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| Symbol | |
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| ID | 4038761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2128466 |
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| End bp | 2129701 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977339 |
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| Product | acetylornithine deacetylase |
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| Protein accession | YP_584104 |
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| Protein GI | 94310894 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000205463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGA CGTTTCAACG CCCCATGCCA GCCCAACCCG ACAACCGATC CGCCGCCACC
AATGCCCCCG CGCGTGGCAG CGCGCTCGAA TGGACCGAGC GCCTGGTATC GATGGATACC
ACTTCCCGCC ATTCGAATCT GGGCCTGATC GAGTCCGTGC GCGACCACTT CCTGGCCAAG
GGCCTGCGCC CCCATCTGAG CTACAACCCG CAGGGCGACA AGGCCAACCT GTTCGTGACG
ATTCCCGCAG CCGATGGCGC CACCAATGGT GGCATCGTGC TGTCCGGGCA CACGGACGTG
GTGCCCGTCG ACGGGCAGAA CTGGAGCACC GACCCGTTCA AGCCGGTGGT GCGCGACGGC
AAGCTCTACG GTCGCGGCAC CTGTGACATG AAGGGGTTCA TCGGCACGAG CCTGGCGCTG
CTGCCGACCA TCCTTGATGC CAGGCTGCGC GAGCCAGTGC ACTACGCACT GTCGTTCGAC
GAAGAGATCG GCTGCATGGG CGCGCCGTAC CTGCTGGCCG AACTGCGTGA CCGTGGCGTG
CGCCCGGCGG GCTGCATCGT CGGCGAGCCG ACCAGCATGC GCGTGATCGT GGCGCACAAG
GGCATCAATG CCTACCGGTG CTGCGTTAAG GGCCAGGCGG CGCACTCGTC GCTGACCCCT
AAGGGCGTCA ATGCGATCGA GTACGCCGCG CGCCTGATCT GTTTCATTCG CGATATTGCC
GACGAGTTCA AGGCCAATGG CCCTTACGAC CGGGCCTTCG ACGTGCCGTT TACGACCGCT
TCGACCGGCA CGATCCAGGG TGGCATCGCG CTAAACACCA TTCCCGCCGA GTGCGAATTC
GTCTTCGAGT TCCGGAATCT TCCTGGCGTT GATCCGGAAG CGATCCTGGC GCGCATCCAG
GCCTACGCGA ACGATGTGCT GTTGCCGAAG ATGCGCAACG AGCATCCGGA TGCCGGCATG
GCCATCAGCA AGATCGCCGC CGCGCCTTCG CTCGATGCCG CCGAGACCGA TGCCATTACC
CAGCTCGTAC GCGCGCTGAC CGCCGACCGC GATACCAACA AGGTGGCCTA CGGCACCGAG
GCTGGCCTGT TCCAGCGCGC AGGCATTCCG GCTGTGGTGT GCGGCCCCGG CGATATCCAG
CAGGCGCACA AGCCCGACGA GTTCGTCTCG CTGGATCAGC TTGCCGCGTG CGAGACCTTC
CTGCACAAGG TGGTGGATAG CCTGCGCGTC GCCTGA
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| Protein sequence | MNQTFQRPMP AQPDNRSAAT NAPARGSALE WTERLVSMDT TSRHSNLGLI ESVRDHFLAK
GLRPHLSYNP QGDKANLFVT IPAADGATNG GIVLSGHTDV VPVDGQNWST DPFKPVVRDG
KLYGRGTCDM KGFIGTSLAL LPTILDARLR EPVHYALSFD EEIGCMGAPY LLAELRDRGV
RPAGCIVGEP TSMRVIVAHK GINAYRCCVK GQAAHSSLTP KGVNAIEYAA RLICFIRDIA
DEFKANGPYD RAFDVPFTTA STGTIQGGIA LNTIPAECEF VFEFRNLPGV DPEAILARIQ
AYANDVLLPK MRNEHPDAGM AISKIAAAPS LDAAETDAIT QLVRALTADR DTNKVAYGTE
AGLFQRAGIP AVVCGPGDIQ QAHKPDEFVS LDQLAACETF LHKVVDSLRV A
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