| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1954 |
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| Symbol | ispD |
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| ID | 4038759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2124024 |
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| End bp | 2124848 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637977337 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_584102 |
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| Protein GI | 94310892 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.969692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGG GCGAGGGCCG TATTATAGAA TGCACCCCGG CCGGTTTGCC GGCCGGTTTC
CGATATTCCA TCTCCCGCAA ATCCGTGTCA GATCGCCGCT TCGCCCTGAT TCCCTGTGCC
GGTACCGGCA GTCGTGCCGG AGGCCCCATC CAGAAGCAGT ACCAGACCGT GGCCGGACGG
CCGATGCTTT GGTATGCGCT GGCCGCCTTT TCCGCTTGCG ATGCCATCAG CGCCACCGCG
CTGGTGCTGG CCCCCGACGA CATGCCGCTC GAGTCCCGTT TCGGCGCCGC CGCCTTTGCC
GGGCTCCGCT TCGATACAGC GTTCGTCGGC GGTGATTCCC GCCATGCCTC GGTACTCGCC
GGTCTCCATC ATCTTGGGAC CATGGGCGCA GTGGATACCG ACTGGGTGCT CGTGCACGAT
GCGGCCCGGC CCGGCCTGAC GCCCGCGATG ATCGACACAC TTGTGCGCGC TGTCGAGTCC
GACGATGCCG CCAGCGAGCC GATCGGCGGC ATTCTTGCCG TGCCGGTGCC GGACACGCTC
AAGCGTGCCG ACGCCGCTGC CCGCATCGGC GCCACCGTGC CGCGCGAAGG ACTGTGGCAA
GCCCAGACAC CGCAGATGTT CCGAATCGGC GTGCTGCGCC ATGCGCTGGA GGATGCGCTG
GCCGCGGGCG CGGTGGTGAC CGACGAGGCG AGTGCGATCG AGCGGCTTGG ACTGCATCCG
CGCCTGGTGA ATGGTTCGCT GCGCAACTTC AAGGTGACAT ACCCCGAGGA TTTCGCGCTG
GCGGACGTAC TGTTGCGCAC TGGCACACCG ACTTCCAACA CGTGA
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| Protein sequence | MAAGEGRIIE CTPAGLPAGF RYSISRKSVS DRRFALIPCA GTGSRAGGPI QKQYQTVAGR
PMLWYALAAF SACDAISATA LVLAPDDMPL ESRFGAAAFA GLRFDTAFVG GDSRHASVLA
GLHHLGTMGA VDTDWVLVHD AARPGLTPAM IDTLVRAVES DDAASEPIGG ILAVPVPDTL
KRADAAARIG ATVPREGLWQ AQTPQMFRIG VLRHALEDAL AAGAVVTDEA SAIERLGLHP
RLVNGSLRNF KVTYPEDFAL ADVLLRTGTP TSNT
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