| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1934 |
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| Symbol | |
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| ID | 4038739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2103010 |
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| End bp | 2103897 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637977317 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_584082 |
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| Protein GI | 94310872 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00302437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.783819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATGA CATTGAACAA GGCCGTGGCA CCGCTTCCCG TGGAGCGTTC ACCCGGATAC
TGGACCACGG TCTGCCGCCG GCTGCTGCGC AACAAGCTCG CGATGCTGGC CGCACTGATC
CTGATCGTGC TTGTCCTGAC GGCGATCTTC GCGCCGGCGC TGATGCCTGC CGACCCCTAT
GCGTCGTCGA TTCTCAAGCG ATTGAAGCCG ATCGGCTTCG ACGGTCACCT GCTTGGCACC
GACGAACTGG GCCGCGACAT GCTGTCGCGC CTGATGCTTG GCGGGCGGTT GTCGCTATTC
ATGGGCATCA CGCCGGTACT GCTCGCCTTC CTGATCGGCA GCACGATCGG CATCGTCGCC
GGTTATGCGG GTGGCTGGAC GAACACCGTC ATCATGCGGC TCACCGACAT CCTCTATGCG
TTTCCCTCGG TACTGCTGGC CATCGCGCTA TCCGGCACAC TGGGCGCGGG GGTTGGCAAC
GCATTGTTAT CGTTGACCAT CGTGTTCGTG CCGCAGATCG TTCGCGTCGC CGAAAGCGTG
ACCACGCAGG TACGCAACCG GGAATTCGTC GATGCCGCCC GCGCCTCGGG CGCATCGTCG
CTGACCATCG TGCGCGTGCA TGTCCTCAAC AACGTGCTCG GCCCAATCTT CGTTTATGCC
ACGAGCCTGA TCTCGGTCTC GATGATCCTG GCTTCCGGGC TGTCGTTCCT GGGGCTTGGC
GTCAAGCCAC CGGAGCCCGA ATGGGGCCTG ATGCTGAACA CCCTGCGCAC CGCCATCTAC
ACCCAGCCAT GGGTGGCCGC GTTGCCCGGC GCGATGATCT TCCTGACCTC GATCTCGTTC
AACCTGCTGG CCGATGGCAT TCGCTCGGCC ATGGAAATCA AGGAGTAA
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| Protein sequence | MEMTLNKAVA PLPVERSPGY WTTVCRRLLR NKLAMLAALI LIVLVLTAIF APALMPADPY
ASSILKRLKP IGFDGHLLGT DELGRDMLSR LMLGGRLSLF MGITPVLLAF LIGSTIGIVA
GYAGGWTNTV IMRLTDILYA FPSVLLAIAL SGTLGAGVGN ALLSLTIVFV PQIVRVAESV
TTQVRNREFV DAARASGASS LTIVRVHVLN NVLGPIFVYA TSLISVSMIL ASGLSFLGLG
VKPPEPEWGL MLNTLRTAIY TQPWVAALPG AMIFLTSISF NLLADGIRSA MEIKE
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