Gene Rmet_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1930 
Symbol 
ID4038735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2098060 
End bp2098845 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID637977313 
ProductIclR family transcriptional regulator 
Protein accessionYP_584078 
Protein GI94310868 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG ACGACAAAGA ACGCCCCGAC CCGCTGTTCA ACCAGTCCCT TGAAAAGGGC 
CTCGAAGTAC TGCGTGCATT CAGCGCCGTG CATCGCACGC TGACGTTGGC CGAGCTGGCA
GCACTGACAG GCATGACCAA GAGCTCCGCC CAGCGCACGA TCCACACGCT GGAGCGGCTC
GGGTACGTCG ACAAGCATCC CCAGACGAGG CGTTTCCGGC TGACGCCCAG AGTGATGGAG
ATCGGCTACA ACTACCTTGC CGCAGACGCC CTGATTCCGA TCGCCAGCCC CTACCTCTCG
CAACTGGCCA ATGCCAGCGG CGAGACCGCC AACCTGACCG AGCCTGTCGG CCTGGAGATG
GTCTACATGG CGCAGCTCGT GACCGCCAAG CACATGCCAG TGCTGACGCC GGTGGGCATG
CGGATTCCGA TGTACTGCAC AAGCTCGGGA CGCGCCTACC TGAGCACGCT GCCGGACGAA
CGTGTGCGAG CGATGCTTGA AGCGTCTGCG CGCACGCCAC GCACGCCGGT CACGCTGACC
GACGTCGAAA CCATCTTCGA GCGCGTCGTG GCGTGCCGCA CGGTCGGTTA CGCGTGCAAC
GAGGAGGAAC TGTTCCTGGG CGATATGGGA ATTGCCGCGC CGGTGGTGAA CAGCCGTGGC
GAGGCAGTGG GAGCGGTCCA TGTTTCGCCA CCAGCCAGCC GCTGGACCAT GGTCGACGCG
CAGAAAAAGC TCGGCCCGCT GGTGGTCGAA TGCGCGTGGG CGATCTCGCG ATCGATCGCC
CACTGA
 
Protein sequence
MTTDDKERPD PLFNQSLEKG LEVLRAFSAV HRTLTLAELA ALTGMTKSSA QRTIHTLERL 
GYVDKHPQTR RFRLTPRVME IGYNYLAADA LIPIASPYLS QLANASGETA NLTEPVGLEM
VYMAQLVTAK HMPVLTPVGM RIPMYCTSSG RAYLSTLPDE RVRAMLEASA RTPRTPVTLT
DVETIFERVV ACRTVGYACN EEELFLGDMG IAAPVVNSRG EAVGAVHVSP PASRWTMVDA
QKKLGPLVVE CAWAISRSIA H