Gene Rmet_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1918 
Symbol 
ID4038722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2085889 
End bp2086488 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content54% 
IMG OID637977300 
Producthypothetical protein 
Protein accessionYP_584066 
Protein GI94310856 
COG category[S] Function unknown 
COG ID[COG3548] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.990062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA ACAAGAGTCG GCTGGAATCA TTCAGCGATG GAGTGATTTC CGTGAGCTTG 
ACGCTGATGC TCTATCAGAT TCAGCTTCCA GCGGAGTTCA ACTGGACTGG CGTACGAGCA
GAGGCGCCCC ATTTCTTTGG ATACGTGCTC AGCTTCATCT ATGTCGGCAT CTACTGGAAC
AATCACCATC ACCTGTTCCA GATGGTGCGT GGTATCAACG GGAAGGTCAT GTGGGCGAAC
CTCAATCTGT TGTTCTGGCT GACGATGATT CCTATCACCA CCACCTGGAC TGGCAAGTCG
GAATTCTCGG AGATTCCAAC CGCGCTGTAC GCCTTTGTGC TCTTTATGTG CGCCATATCC
TATTGGATTC TGCAGCGCGT CATCATGGCA TCGGAGGGAC AGGGCTCCAT GCTCGCAGGT
GCCATCGGCA AGGATCGGAA GGGCAGGGTA TCGCTCGTCG TGTACGCATT GGCGATCGTG
GTGAGTTTCT TCAGCAGCAT CGCGGCAACA CTCATTCTGA TTGCGATGGC TGCATTCTGG
TTTCTGCCCG ATTCGCGAAT CGAGCGCTAT CTTCTGGGGC AGGGCGGCAG GGATTCATAG
 
Protein sequence
MTINKSRLES FSDGVISVSL TLMLYQIQLP AEFNWTGVRA EAPHFFGYVL SFIYVGIYWN 
NHHHLFQMVR GINGKVMWAN LNLLFWLTMI PITTTWTGKS EFSEIPTALY AFVLFMCAIS
YWILQRVIMA SEGQGSMLAG AIGKDRKGRV SLVVYALAIV VSFFSSIAAT LILIAMAAFW
FLPDSRIERY LLGQGGRDS