| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1905 |
|---|
| Symbol | |
|---|
| ID | 4038709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2074617 |
|---|
| End bp | 2075684 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637977287 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_584053 |
|---|
| Protein GI | 94310843 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.680295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCATC GCCAACCCGT AATCGCACCG CCCGCTGCCA ACATGCCCGA GCGCAAACGC
CTGACTCTCA AAGACCTGGC TGCCGAGATT GACGTCCATT ACTCCACCGT CTCGCGCGTG
ATGAATCCGG CCACGCGGCA TCTGGTGGCC GACGAGGTGG CCGCACGCAT CCTGCAGTTG
GCCGAGCAGC GCGGCTTCCG GCCGAACCGG ATCGCGGCCG GCCTGCGCAC GCAGCGTTCC
GGACTGGTCG GCGTGGTGCT GCCCGATATT GCCAACCCGG TGTTCCCGCC GATCCTTGCT
GGTATCGAAT CGGTGCTGGC GCGTGACGGC TATGTGCCGA TCGTCGTCAA TGCCGGCGCC
GACAAGTCGC GTCAGCGGTT CGTCATCGAC CAGTTGATGG GGCGGCAGGT GGAAGGACTG
GTGCTGGCCA CAGCAGAGCG CGACGACCCG ATCCTCGACT ACTGCCTGAA GCTTTCCATC
CCGGTGGTGA TGGTCAACCG GGGTGAGCCG ACGGGGTGCG CATCGTGCGT GGTCAGCGAT
GGCTTGCTGG CGATGCAGCT GACTGTCGAT CACCTGGTGA AGCTTGGTCA TCGCCGCATC
GGCCATATCG CCGGACCGGA GACCACGTCC ACTGGCCAGC AGCGCCGCGA AGGCTTCCTG
CAGGCGGTCA AGCGCCATCG CTTGCGCCGC GACGACTACG CGGTGGTGGA GGCCGTCAGC
TACTCCCGTG AGGCCGGACG TGAAGCCTGC GCCGAACTGT TCCAGGCATT GCCGGGCCTG
ACCGCGATCG CGGCCGGCAA CGACCTCGTC GCGATGGGCT GCTATGACTA TTTGCGCGAG
CACGGCATCC GCTGTCCGGA TGACGTATCG GTTGTCGGGC ACAACGACAT GCCGTTCGTG
GATGCGCTGA CCCCACCGCT GACGACGATC CGTATTGCCG TGCACGAGAT GGGCGAGCAG
GCCGCTACGC TGCTGCTCAA GAAGATCGGC AAGCCGGAGG CGCCAGTGGT ATCCGTCTCG
CTGACGCCCG AACTCGTCGT GCGTGGTTCG ACGGCCGCGC CGCGCTAA
|
|---|
| Protein sequence | MAHRQPVIAP PAANMPERKR LTLKDLAAEI DVHYSTVSRV MNPATRHLVA DEVAARILQL
AEQRGFRPNR IAAGLRTQRS GLVGVVLPDI ANPVFPPILA GIESVLARDG YVPIVVNAGA
DKSRQRFVID QLMGRQVEGL VLATAERDDP ILDYCLKLSI PVVMVNRGEP TGCASCVVSD
GLLAMQLTVD HLVKLGHRRI GHIAGPETTS TGQQRREGFL QAVKRHRLRR DDYAVVEAVS
YSREAGREAC AELFQALPGL TAIAAGNDLV AMGCYDYLRE HGIRCPDDVS VVGHNDMPFV
DALTPPLTTI RIAVHEMGEQ AATLLLKKIG KPEAPVVSVS LTPELVVRGS TAAPR
|
|---|
| |