Gene Rmet_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1903 
Symbol 
ID4038707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2072132 
End bp2072869 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content59% 
IMG OID637977285 
Producthypothetical protein 
Protein accessionYP_584051 
Protein GI94310841 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCG TCATTCTTAT CGTCTTTGCT TGCTGCTTCG TACTGGAGCG CATTGCGCCG 
AGCTGGCCCC TGCCGCGCGT GCGCACATGG CCTGTTCGAG TCCTGCTGGT CAACGCCGTC
CAACTCGGTG TTGTGTTGCT CGCCGGCATG AGTTGGGAAC GGTGGCTGGC ATCGTGGTCG
CTGTTCCGCC TCTCGGACCA TGTTTCGCCG GCCGCCGGGG GGCTCCTCGC CTACTTCATC
GCGACCTTCG TCTTCTACTG GTGGCATCGC TGGCGCCACG AGTCGGACTT GCTCTGGCGC
CTGTTCCACC AGATCCATCA CAGCCCGCAA CGGCTTGAGG TGATCACGTC GTTCTACAAG
CACCCCGCTG AGATGGTTGT CAATTCAATA ATCGGCAGCC TGTTGGTCTA CACGTTGCTT
GGCCTGTCGC TTGAGGCGGG CGGCGTCTAT ACGCTGTGCA CTGCGTTGGG TGAATTCTTC
TATCACACCA ATGTCAGGTC GCCACGTTGG GTCGGATTTG TGTTCCAACG GCCAGAAATG
CATCGCATCC ACCATCGTCA TGGGCATCAC CGGAACAACT ACGGTGACAT CACCTGGTGG
GACATGCTCT TCGGCACCTA TGAGAATCCG GCCGAATGGC GGGACAGTTG CGGCTTTGAT
AACAACCGCG AACAGCGGCT GACGGAGATG CTGGCCTGGC GTGATGTCCA TGCTGATAAG
CGGCCGGATT CGCGGTGA
 
Protein sequence
MISVILIVFA CCFVLERIAP SWPLPRVRTW PVRVLLVNAV QLGVVLLAGM SWERWLASWS 
LFRLSDHVSP AAGGLLAYFI ATFVFYWWHR WRHESDLLWR LFHQIHHSPQ RLEVITSFYK
HPAEMVVNSI IGSLLVYTLL GLSLEAGGVY TLCTALGEFF YHTNVRSPRW VGFVFQRPEM
HRIHHRHGHH RNNYGDITWW DMLFGTYENP AEWRDSCGFD NNREQRLTEM LAWRDVHADK
RPDSR