| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1899 |
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| Symbol | |
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| ID | 4038703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2067195 |
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| End bp | 2068907 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637977281 |
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| Product | pyruvate dehydrogenase (cytochrome) |
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| Protein accession | YP_584047 |
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| Protein GI | 94310837 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAGA AAGTTGCGGA GATCATCGTA GAGGTACTCG AACAGGCTGG CGTCAAGCGC
TGCTATGGCA TTGTCGGCGA CACCCTCAAC CTGATTGCCG AACACCTCGA TCGAAGTTCC
ATCGACTGGG TCGGTGTTCG TCACGAAGAA GCGGGCGCCT TCGCGGCAGG CGCTGAGGCG
CTATACACCA ACAACCTGAC AGCGTGCGCC GGAAGCTGCG GCCCAGGCAG TCTGCACTTC
ATCAACAGCC TGTACGAGGC CAATCGCAAT CGCGCTCCGG TTGTCCTGAT CGCCAGTCAG
GTAGCGATGA GCGAGATGGG CTTCGAGTTC ATTCAAGAGG TGGATTTCAA GTCGGTCTTC
AAGGAATGCT CGGTGTTTTG CGACATGATC CTGACGCCCG AACAGGCCCG CAGGAAAACC
GCGATGGCCT GTCAGACCGC ACTGACCAGG CGCGGCGTTG CCGTGTTGAT CGTGCCGGTG
GACATTTCAC ATGGCGAAGT GAAGGAGGAC TTCCCTTATC GCGTTCACCA CAGTCGTCCA
TCCATCCGGC CGAATGACGC GGAGATCGGA GCCATCGCAG AGGTCCTGAA TGCCGGCAGG
AAGACTGCCA TTTATGCGGG GTCCGGCTGC GAGCAGGCGC TCGCCGAGAT CATGGCCGTC
GCGGAAAGGC TTAAGGCGCC GGTCGCCCAT ACCTCGCGCG CGAAGAACTG GCTCGAACCG
GGCAATCCGT ACAACATCGG CATGACGGGC ATCCTGGGGA ACGAAGCCGG CTATAACGCG
GTGCTCGAAT GCGACACGCT GCTGTTGCTC GGCGCGGATT TTGCGTGGCG CCAGTTCTAT
CCCGATGGGG CAAAGATCGT GCAGATCGAC ATCGACCCAA CGCATCTGGG CCGACGCCAC
CCCATCACGC TGGGCGCGGT AGGCGACATC CAAACTACGC TGCAGGCATT GCTGCCGCAT
CTGGACCAGC ACGAGGACGC GTCATTCCAG GAGAAATACA TCAAGCGTTA TGCCGAAGCG
ATGGTAGCGG CAAGGAAGCC TCTCATCCCG GGCCACAACG ACAGCATTCC CGGCTCGTAC
CTCGCGTCAA TCATCGACAA GCACGCCGCC GACGATGCGC TGATCTGCGC TGACGATGGC
AGTCCGATCG TGTGGGCGTT GCGTCTGTTC GACGCCAACG GCAAACGCCA GATCTTCGGC
AGCCTCCTGC ACGGCACCAT GGCGAGCGCC TTGCCCAGCG CACTGGGCCT GCAGAAGGCA
TGCCCCGATC GCGAGGTCAT CGCCATGTGC GGCGACGGCG GCATTACGAT GCTGTTCGGC
GAACTGCTCA CCACGATCCA GGAAGAGGTG CCCATCAAGA TCGTGGTGTT CGACAACAGC
AAGCTTGGCT TCGTGGAGAT CGAGCAGAAG GCCGAGGGCA TGCTCGACAC CTTTACGAAA
CTGAAGAACC CAGACTTCGG CAAGGTGGCG GAGGCCATCG GCCTCTGGGG CAAGACGGTG
CGCAAGGCCT CTGAGCTGGA CGCGTCGGTG CAGGAGTGGC TGTCGCAACC CGGCCCTGCG
CTTCTCAATG TCATCGTCAA TCCGCTGGAA CTGGTCAAGC CACCCTTCCT GGAAGCCGGC
CCCGTGATCG GCATGGCGAT GTACTCCGTG CGCGCCATCC TCAACGGACG CGGCGCGGAT
GTACTGGAAA TGGTGCGCGA GAACTTCCGC TGA
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| Protein sequence | MGKKVAEIIV EVLEQAGVKR CYGIVGDTLN LIAEHLDRSS IDWVGVRHEE AGAFAAGAEA
LYTNNLTACA GSCGPGSLHF INSLYEANRN RAPVVLIASQ VAMSEMGFEF IQEVDFKSVF
KECSVFCDMI LTPEQARRKT AMACQTALTR RGVAVLIVPV DISHGEVKED FPYRVHHSRP
SIRPNDAEIG AIAEVLNAGR KTAIYAGSGC EQALAEIMAV AERLKAPVAH TSRAKNWLEP
GNPYNIGMTG ILGNEAGYNA VLECDTLLLL GADFAWRQFY PDGAKIVQID IDPTHLGRRH
PITLGAVGDI QTTLQALLPH LDQHEDASFQ EKYIKRYAEA MVAARKPLIP GHNDSIPGSY
LASIIDKHAA DDALICADDG SPIVWALRLF DANGKRQIFG SLLHGTMASA LPSALGLQKA
CPDREVIAMC GDGGITMLFG ELLTTIQEEV PIKIVVFDNS KLGFVEIEQK AEGMLDTFTK
LKNPDFGKVA EAIGLWGKTV RKASELDASV QEWLSQPGPA LLNVIVNPLE LVKPPFLEAG
PVIGMAMYSV RAILNGRGAD VLEMVRENFR
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