Gene Rmet_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1885 
SymbolclpP 
ID4038689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2051060 
End bp2051710 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content59% 
IMG OID637977267 
ProductATP-dependent Clp protease proteolytic subunit 
Protein accessionYP_584033 
Protein GI94310823 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA ATGATTTGCT TGATCGTCTC GCCACCACGC AGGCTTCTGC TCTGGAGACC 
CAGGGTCTTG GTCTGGTGCC GATGGTCGTC GAGCAGTCCG GCCGGGGCGA GCGCGCGTAC
GACATCTACT CGCGCCTGCT CAAGGAACGT GTCGTCTTCA TGGTCGGCGA AGTGAACGAC
CAGACTGCCA ACCTGGTGGT GGCTCAGCTT CTGTTCCTCG AAAGCGAGAA TCCTGATAAG
GACGTGTCGC TGTACATCAA TTCGCCCGGT GGTTCGGTTT CGGCCGGTCT GGCGATCTAT
GACACGATGC AGTTCATCAA GCCCGATGTG CAAACACTGT GCATGGGCAT GGCTGCCAGC
ATGGGTGCAT TCCTGCTCGC AGCAGGCGCC AAGGGTAAGC GCAGCGCGCT GCCAAACTCG
CGAATCATGA TTCACCAGCC GTTGGGCGGT GCGCGTGGTC AGGCTTCGGA CATCGAAATC
CAGGCACGCG AGATCCTGTA TCTGCGCGAA CGCCTGAACA GCATCCTTTC TGAGGTGACC
GGCCAGCCCG TGGAGAAGAT CGCGCGCGAT ACTGACCGCG ATAACTTCAT GAGCGGCGAT
CAGGCTGTGG ATTACGGTCT GATCGATAAG GTGATTACCC GTCGCAGTTG A
 
Protein sequence
MTRNDLLDRL ATTQASALET QGLGLVPMVV EQSGRGERAY DIYSRLLKER VVFMVGEVND 
QTANLVVAQL LFLESENPDK DVSLYINSPG GSVSAGLAIY DTMQFIKPDV QTLCMGMAAS
MGAFLLAAGA KGKRSALPNS RIMIHQPLGG ARGQASDIEI QAREILYLRE RLNSILSEVT
GQPVEKIARD TDRDNFMSGD QAVDYGLIDK VITRRS