Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1885 |
Symbol | clpP |
ID | 4038689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2051060 |
End bp | 2051710 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637977267 |
Product | ATP-dependent Clp protease proteolytic subunit |
Protein accession | YP_584033 |
Protein GI | 94310823 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCGCA ATGATTTGCT TGATCGTCTC GCCACCACGC AGGCTTCTGC TCTGGAGACC CAGGGTCTTG GTCTGGTGCC GATGGTCGTC GAGCAGTCCG GCCGGGGCGA GCGCGCGTAC GACATCTACT CGCGCCTGCT CAAGGAACGT GTCGTCTTCA TGGTCGGCGA AGTGAACGAC CAGACTGCCA ACCTGGTGGT GGCTCAGCTT CTGTTCCTCG AAAGCGAGAA TCCTGATAAG GACGTGTCGC TGTACATCAA TTCGCCCGGT GGTTCGGTTT CGGCCGGTCT GGCGATCTAT GACACGATGC AGTTCATCAA GCCCGATGTG CAAACACTGT GCATGGGCAT GGCTGCCAGC ATGGGTGCAT TCCTGCTCGC AGCAGGCGCC AAGGGTAAGC GCAGCGCGCT GCCAAACTCG CGAATCATGA TTCACCAGCC GTTGGGCGGT GCGCGTGGTC AGGCTTCGGA CATCGAAATC CAGGCACGCG AGATCCTGTA TCTGCGCGAA CGCCTGAACA GCATCCTTTC TGAGGTGACC GGCCAGCCCG TGGAGAAGAT CGCGCGCGAT ACTGACCGCG ATAACTTCAT GAGCGGCGAT CAGGCTGTGG ATTACGGTCT GATCGATAAG GTGATTACCC GTCGCAGTTG A
|
Protein sequence | MTRNDLLDRL ATTQASALET QGLGLVPMVV EQSGRGERAY DIYSRLLKER VVFMVGEVND QTANLVVAQL LFLESENPDK DVSLYINSPG GSVSAGLAIY DTMQFIKPDV QTLCMGMAAS MGAFLLAAGA KGKRSALPNS RIMIHQPLGG ARGQASDIEI QAREILYLRE RLNSILSEVT GQPVEKIARD TDRDNFMSGD QAVDYGLIDK VITRRS
|
| |