| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1882 |
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| Symbol | |
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| ID | 4038684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2044208 |
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| End bp | 2046151 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637977262 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_584030 |
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| Protein GI | 94310820 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.121915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGATT TCGTACGCAA CAACCGGCGC CTGATGCTCC TTCTGCTGCT GGTGCTTGTC
TTCCCGTCGT TCGTATTCTT CGGCGTGGAG AGCTATTCGC GCTTCATGGA CAGCTCGCAC
GATGCTGCCA AGGTCGACGG CCGGGCCATC ACCGTGCAGG AAGTCGACAA TGTGGTGCGC
GACCAGAGCG AACGGATGCG CCAGATGCTG GGCAACAACT ACGATCCGCG CATGTTCGAA
GGCCCTGCCG CGCGGCAGGC CGTGCTGGAC CAGTTGATCC AGCAGCGTGT TATTTCGGAA
GCCACTCAGA AGAAGCACCT GACGGTTTCC GATGCGCAGA TCGCTGCTGC GATCCAGAGC
ATTCCCGCCA TCGCCCAGCT TCGCACGGCG GACGGCAAGT TCGACGAGAA GGCCTACGTG
CAGCTGCTGG CGGCGCAAGG TATGACGCCC GAGCAGCTCG ACGCACGGAT GCGTTTCGAA
CTCTCCACGC AGCAACTGGG TGGTGCCATC GGTACGACAG CTTTCGTGCC GAAGTCGCTG
CTCGATCGCC TGATCGCGAT TCGCGACCAG CAGCGTGATG TGCAGGCCAT CGTGATCAAG
CCGGCCGATT TCACGGCCAA GGTGACGCCG GACGCCGCCG CGCTGAAGGC CTACTACGAG
TCCCATCTGG CAGCGTACAC GATGCCCGAG CAGGCCAAGG TCGAGTATCT GGTGCTGTCG
GGTGATGCCC TGGCTGCCAG CCAGACGATC ACCCCCGATC AGTTGAAGTC GTATTACGAC
AGCAACATAC AACGTTTCCA TACTGACGAG CAACGTCGCG CCAGCCACAT CCTGATCGCC
GCGCCGAAGG ATGGCAAGGA GGCAGACCGC AAGGCCGCCA AGGAGAAGGC CGAGAAGCTG
CTGGAGGACC TGCGCAAGCA TCCAGACACG TTCGCCGATG TTGCGAAGAA GAACTCGCAG
GATCCTGGTT CGGCGGAGAA GGGCGGCGAC CTCGGCTTCA TGGGTCGTGG TGCCCTGGTC
AAGCCGTTTG AAGACGCGAT GTTTGCGCTC AAGGATGGCC AGATCAGCGA TGTTGTGGAA
ACCGATTACG GCTATCACAT CATCAAGCTG ACGGGTATCA AGCCGGCAGC GACCGAGCCG
CTCGAGGCAG TGCGTCCCGA ACTCGAGATC GAACTCAAGA AGCAGCTTGC CGCGAAGGCG
TATACCGAGC AGGCCGATGC GTTCGGCAAC ATGGTGTACG AGCAGTCCGA GAGCCTCAAG
CCCGCCGCCG ACAAGTTCAA GCTGACGATC CAGACTGCGG ACAATGTCAC GCGTACGCCG
AATCCGGTGT TGGGCAAGGA CAACCCGCTC AATAACGAGA AGGTGCTCAA GGCGCTGTTC
AGCGATGACG CCATCAAGAA CAAGCGCAAT ACGGAAGCCG TGCAAGTCGG CCCGACTACG
CTGGTGTCGG CGCGCATCGT CGACTATCGC CCGGCCGCCG CGCGCAAGTT CGAAGAGGTA
GAGGCGCTGG TGCGTCAGGC CTACGTCGCA CAGCAGGCGG CGGAACTGGC ACGCAAGGAT
GGCGAAGCCC GTCTTGATGC CTTGAAGAAG AGCGGCAGCG CTGATGGCTT CGGCTCGATG
GTGACCGTGT CGCGTGCCAA GGCTGATGGC GTGTCGCCGA AGGCTGTCGA TTCGATCATG
CGTGCCGATG CCTCGAAGCT GCCTTCGCTC GTGGGTGTGG ACCTCGGCGC GGATGGGTAC
GCGATCTACC GTATCGCCAA GGTTGGCACG CCGCCGCAGG CCAACGCAAA CCAGCGTGAG
GCTGACGCGC AGCAACTGGG CCAGATGGCC GGCCAGACGG AACTGGCAGC GTTCTATGAC
GTGCTCAAGG CCGGTGCGAA GGTGAAGATC CTGCATCCGG CCAAGACGGA CGACGCGGCA
GCGAGCGCAC CTGCTGCACA CTGA
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| Protein sequence | MLDFVRNNRR LMLLLLLVLV FPSFVFFGVE SYSRFMDSSH DAAKVDGRAI TVQEVDNVVR
DQSERMRQML GNNYDPRMFE GPAARQAVLD QLIQQRVISE ATQKKHLTVS DAQIAAAIQS
IPAIAQLRTA DGKFDEKAYV QLLAAQGMTP EQLDARMRFE LSTQQLGGAI GTTAFVPKSL
LDRLIAIRDQ QRDVQAIVIK PADFTAKVTP DAAALKAYYE SHLAAYTMPE QAKVEYLVLS
GDALAASQTI TPDQLKSYYD SNIQRFHTDE QRRASHILIA APKDGKEADR KAAKEKAEKL
LEDLRKHPDT FADVAKKNSQ DPGSAEKGGD LGFMGRGALV KPFEDAMFAL KDGQISDVVE
TDYGYHIIKL TGIKPAATEP LEAVRPELEI ELKKQLAAKA YTEQADAFGN MVYEQSESLK
PAADKFKLTI QTADNVTRTP NPVLGKDNPL NNEKVLKALF SDDAIKNKRN TEAVQVGPTT
LVSARIVDYR PAAARKFEEV EALVRQAYVA QQAAELARKD GEARLDALKK SGSADGFGSM
VTVSRAKADG VSPKAVDSIM RADASKLPSL VGVDLGADGY AIYRIAKVGT PPQANANQRE
ADAQQLGQMA GQTELAAFYD VLKAGAKVKI LHPAKTDDAA ASAPAAH
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