| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1880 |
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| Symbol | |
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| ID | 4038682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2042707 |
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| End bp | 2043294 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977260 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_584028 |
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| Protein GI | 94310818 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.234767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCATTG TCGGGGCGTC TGGGTCGGGC AAGTCCACGC TACTTGGCCT GCTTGCCGGG
CTCGATCTGC CGAGCACGGG ATCGGTCCGG CTCCATGGTC AGGATCTGTT CCGGCTCGAT
GAAGACCAGC GTGCCGCGCT GCGCGGGCGT CACGTTGGCT TCGTGTTTCA GTCGTTCCAG
CTGGTCGGCC ATCTGACCGC GCTGGAGAAC GTAATGCTTC CGCTCGAGTT GCGTGGCGAG
ACCGATCACG TGCGCGAGCG GGCCGTCGAC ATGCTGGAGC GAGTTGGGCT CGGTCAGCGG
CTGTCCCATT ATCCACGCAC GCTTTCCGGC GGCGAGCAGC AGCGTGTGGC GTTGGCGCGC
GCCTTCGTTG CGCGGCCCGA TATTTTGTTT GCGGACGAGC CGACCGGAAG TCTGGACACC
GCCACGGGCG AGGCGGTCAT CGCGCTGATG TTCGAGCTCA ATCGCGATGC GGGATCGACA
CTCGTGCTGG TCACGCACGA CCGTTCGGTG GCGGCGCGAT GCGGCCGCAT CCTGACGATC
GAGGCTGGCC GTGTAGCCAG CGATGAGTTC ATGGATGTGG GCGTCTGA
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| Protein sequence | MAIVGASGSG KSTLLGLLAG LDLPSTGSVR LHGQDLFRLD EDQRAALRGR HVGFVFQSFQ
LVGHLTALEN VMLPLELRGE TDHVRERAVD MLERVGLGQR LSHYPRTLSG GEQQRVALAR
AFVARPDILF ADEPTGSLDT ATGEAVIALM FELNRDAGST LVLVTHDRSV AARCGRILTI
EAGRVASDEF MDVGV
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