| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1872 |
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| Symbol | |
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| ID | 4038674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2031388 |
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| End bp | 2033148 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637977252 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_584020 |
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| Protein GI | 94310810 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.10295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.872274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCCG CCTCCGATAC CGGACAACTG GTCCCGTCCG ACAGGTTCCT GAGCCGGCTA
TGGCTTGCGC TCATCAGGCG CCCTCGCCGC TTCATTCTGA TTGCGTTCAG CGCCGCCATT
CTCCTGATTT TGCTGCTCAT CTTCCGAGGC ATGATGCTGT CGCGCGACGC GGAGATCGAG
TCGGTCAGGC AAATGCAGGC GGTTCGTGCC GTGAGCATCA ACGCGCTGCT TCAACTGGAG
GCGGAGCGCC TGACGAACAT CCGGAACTAC GCCGAGCACC TGATGCAGAT CCAGGACGAA
TTGCCAGCCC TCTTCGCCCA CGACATCCAG ACTGCCTTCG AGCACCGCAA TGACGATGTC
TGGGCGCTGC GGACACGTGA CGCGGCGCCC GTCTTTGGCG TCAGCGCGGC GCAGCTCACT
GGGCTGGATG GCTTCTTGCG CGACGATGCC AAGCTGATCC CGAGCATGGC GGTCGCAATC
GCGCTCAGCC ATATGTTCAG TGCGGGACAC AACGAACCCG GGCTCCGGGA ACGCATTGCC
TATGTGTCCG GCAACGGCAT CATCGTGGCT TACCCGGCCA TTAGCGAACA GGACGTTAAT
CCCACCCTGC GGAGCCTCGC CTCCGCCGCG TACTTTCGCA ATAACCTCCC CTTGGCCAAT
CCAACGCGAA AGCAGCAATG GAGCATCGCG CGGTCTATGG ACGACATTGG CGAATCGTCA
CTATTCCTGA GCGCTCCTGT CTATGCCGGC AACGCGTTCA AGGCCGTTCT GATCCTGGAG
ATTCCGCGGC ACAGTCTTGA CGAGTCCCTC AACGTTGCCC CCCATCACGA CGTCAACAAC
TACCTGGTGG ACCACAACGG CGCGCTCGTG GGCGCCAGTA TGCGAAACGT GCACCGGGGC
GAATCGCTCG CCTCCGTGCT CATCAACAAA TGGCCAGCGG ACAAGCTCGC GGTGGCATTC
AGGAGCGATG CCGGCATCCT GAGCAACGAG CATGGCAGCC GCCTCATTTA TCGCAAGCTC
GGAAACAGCG GCCTGATCAT GGTCGACGAG GTCTCCACCC GTGAACTGCT ACAGGCAAGC
GTCGCCCGCC TGAGCGGCGC CATCGGCGCC GGCGCTGTCG CCCTGGGCCT TCTGCTCTGC
TTCACGCTGG CAATTGTCCA TACATTGTTC GGGCACTACA TTGCCCGGGG CGAAGCCCTC
CGGACCCTCG CCGAAACCGA TGCCCTGACC GGGTTGGCGA ACCGTCGCGT GTTCGCATCC
CGATTCGCAG ACGCCTACGC ATGGTGCAAG CGGGACGCCG TTCCGGTCTC GCTGATCATG
CTCGACATCG ACCGTTTCAA GAAGATCAAC GACCGCTGGG GACACGCCAG CGGAGACGTG
GTACTGCGTA CCCTGGCGGA CGCGCTGCGC GCGAATGTCC GGAATGTCGA TCTGCCGGCG
CGACTTGGCG GCGAGGAGTT TGCCGTCCTG TTGCCACGCA CGGGTATCGC GGATGCAGCC
AACCTGGCCG AGAAGCTTCG CCTGGCCCTG CAGGCATTGG TCTGCGAACC GGTCGACAGC
GACGACACGG CATCCATCCG TTTCACCGCG TCCTTCGGCG TGGCGCAGAT TGCGCCGGAC
GAACCGGGCA ACCTCGACTC GCTGCTGATG GTGGCGGACC AACGCCTCTA TGCCGCGAAG
GCCGGCGGCC GGAACAAGGT CGTCTGGGAT GAGCCGCAGC CGGAGGAGAT GGCTAACGAG
AAGCCCGTCA AGGGGACCTG A
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| Protein sequence | MHSASDTGQL VPSDRFLSRL WLALIRRPRR FILIAFSAAI LLILLLIFRG MMLSRDAEIE
SVRQMQAVRA VSINALLQLE AERLTNIRNY AEHLMQIQDE LPALFAHDIQ TAFEHRNDDV
WALRTRDAAP VFGVSAAQLT GLDGFLRDDA KLIPSMAVAI ALSHMFSAGH NEPGLRERIA
YVSGNGIIVA YPAISEQDVN PTLRSLASAA YFRNNLPLAN PTRKQQWSIA RSMDDIGESS
LFLSAPVYAG NAFKAVLILE IPRHSLDESL NVAPHHDVNN YLVDHNGALV GASMRNVHRG
ESLASVLINK WPADKLAVAF RSDAGILSNE HGSRLIYRKL GNSGLIMVDE VSTRELLQAS
VARLSGAIGA GAVALGLLLC FTLAIVHTLF GHYIARGEAL RTLAETDALT GLANRRVFAS
RFADAYAWCK RDAVPVSLIM LDIDRFKKIN DRWGHASGDV VLRTLADALR ANVRNVDLPA
RLGGEEFAVL LPRTGIADAA NLAEKLRLAL QALVCEPVDS DDTASIRFTA SFGVAQIAPD
EPGNLDSLLM VADQRLYAAK AGGRNKVVWD EPQPEEMANE KPVKGT
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