| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1862 |
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| Symbol | |
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| ID | 4038664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2018338 |
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| End bp | 2019588 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637977242 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_584010 |
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| Protein GI | 94310800 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.485563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.350266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGT TGCGTCCGCT GGTAACCGGG GTGGCGGCAG TTGTGGCACT GGGTTCCGCG
CTGGTATCGG GAGTGGCTGC AGCCGATACG GTGAAGATCG CGTTTATCGA TCCGCTTTCG
GGTTTGATGG CCCCCGTGGG CCAGAACCAG CTCAAGAGCT GGCAGTACGT GGCCGACGTG
GCTAACCAGA AGAACTGGGC GGGCGCGCAC AAGTTCGAGG TAGTGGGGTT TGACAACAAG
CTGTCGCCGC AGGAAAGCCT GACCATCCTC AAGCAGGCCG TGGACCAGAA CATCCGCTAT
ATCGTCCAGG GCAACGGCTC CGCCGTGGGG CTGGCGCTGG AAGACGCGGT GGCCAAGCAC
AACGAGCGCA ATCCGGGCAA GGAAATCGTC TACCTGAATT ACGCCGCGGT GGACCCGGAC
ATGACCAACA GCAAGTGCAA TTACTGGCAT TTCCGGCTCG ACGCGAACTC CGACATGAAG
ATGGAGGCGC TGACGACGTA TCTGGCCAAG GACCCGAACG TCAAAAAGGT CTACCTGATC
AACCAGAACT ACTCGTTTGG CCACCAGGTG GCGCGCGCGG CAAAGGAATA CCTGAAGCGC
AAGCGTCCTG ACATCCAGAT CGTCGGCGAG GATCTGCACC CGCTGGCGCA GGTCAAGGAC
TTCGCGCCGT ATGCGGCCAA GATCAAAGCG TCTGGCGCCG ATACGGTGAT CACCGGCAAC
TGGGGTAGCG ACCTTGCGCT GCTGATCAAG GCGGGCAAGG ATGCCGGCCT GCCGGTCAAC
TACTACACGT ACTACGCGGC CACCACCGGG GTGCCGACGG CGATGGGTGC CTCCGGCGCC
GAGCACGTGA AGTACGTCGG CTACTACAAC CCGAACAATC CCACCTTCAA GGGTGGCGAC
ATCGTCGAAG GCTTCAAGAA GAAGTACAAC GACGACTTCT ATGTGATGGC GGCCTACTCG
GGCGTTGCCT TCCTTGCCAA GGCCATGAAG GACACTGGTT CCACGGACCC GGTCAAGGTG
GCCAAGGCGA TGGAGGGCAT GAAGGTCGAG AGCATGAACG GGACGGTGGA AATGCGTAAC
ACCGACCACC AGGCCCAGCA ACCGCTGGTG GTGGCCACCT GGACCAAGGT CAACGGCAAG
GACATCAAGT TTGACCAGGA AAACACCGGC TATGGCTGGA AGACCAACGC GCAGCTCGAC
CAGTTCGTGG CCGCGCAGCC GACTTCCTGT CAGATGAAAC GGCCGAACTA A
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| Protein sequence | MTKLRPLVTG VAAVVALGSA LVSGVAAADT VKIAFIDPLS GLMAPVGQNQ LKSWQYVADV
ANQKNWAGAH KFEVVGFDNK LSPQESLTIL KQAVDQNIRY IVQGNGSAVG LALEDAVAKH
NERNPGKEIV YLNYAAVDPD MTNSKCNYWH FRLDANSDMK MEALTTYLAK DPNVKKVYLI
NQNYSFGHQV ARAAKEYLKR KRPDIQIVGE DLHPLAQVKD FAPYAAKIKA SGADTVITGN
WGSDLALLIK AGKDAGLPVN YYTYYAATTG VPTAMGASGA EHVKYVGYYN PNNPTFKGGD
IVEGFKKKYN DDFYVMAAYS GVAFLAKAMK DTGSTDPVKV AKAMEGMKVE SMNGTVEMRN
TDHQAQQPLV VATWTKVNGK DIKFDQENTG YGWKTNAQLD QFVAAQPTSC QMKRPN
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