Gene Rmet_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1850 
Symbol 
ID4038652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2003969 
End bp2004433 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content62% 
IMG OID637977230 
Productphenylacetic acid degradation-like protein 
Protein accessionYP_583998 
Protein GI94310788 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0992108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCAATC TGTTTTTCAC TGCCCCCAAG GATATGACGC AACGCCAACT CACCATCCCA 
TTCCTCGCTG ATCTCGGCGT ACTCTGCAAT TTTATGGAGA ACGGCCGCAG CGAGATCGAA
CTCGACCTGC AGAAACGCCA CCAGAACAGC TGGGACATGG CCCACGGTGG TGTGACCATG
ACCCTGCTCG ACGTGGCGAT GGCCATCGCC GGACGTTCGT TGGATGCCGA AGGCCGTGGC
GTGGTCACGA TCGAAATGAA GACGAGCTTC ATGGCTCCCG GGCGCGGCAA GGTGTTCGCG
CGCGGCCTGG CCGTGCATCG CACCTCGACC ATGGTGTTCT GCGAGGGCGA GATTGTCGAC
GCGGAAGGCA AGATCGTCGC CAAGGCATCA GGGACGTTCA AGTACATCAA GCGCGTGCCA
CCCAAGCGGG AATCTGGCGC GGCCGATTCG GGCGCGGACG GCTGA
 
Protein sequence
MRNLFFTAPK DMTQRQLTIP FLADLGVLCN FMENGRSEIE LDLQKRHQNS WDMAHGGVTM 
TLLDVAMAIA GRSLDAEGRG VVTIEMKTSF MAPGRGKVFA RGLAVHRTST MVFCEGEIVD
AEGKIVAKAS GTFKYIKRVP PKRESGAADS GADG