Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1841 |
Symbol | |
ID | 4038643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1995729 |
End bp | 1996166 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637977221 |
Product | 4-hydroxybenzoyl-CoA thioesterase |
Protein accession | YP_583989 |
Protein GI | 94310779 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00333557 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.105066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAG AGGATTTTCA TCTCAGCATG CCGCTGCGCG TGCGCTGGGC CGAGGTCGAT CCGCAATCGA TCGTCTTCAA TGCCCACTAT CTGACTTACT GCGATATCTG CTCGACCGAG TACTGGCGCG CGATTGGCGT GCGCTATCCG GAGGACTTGC TGCGCGCCCA TGGCGTGGAC ATCTTCGTGA TCAAGTCCAC GCTGGAGTAC CACGCATCGG CACGGTTTGA CGAGATGCTC GATATTCGCG GCCGCATGGC GCGGCTGGGC CGGTCGAGCA TGGTGTTCCG CGTGGAAATG TATCGCGGCG ACGAGCACCT GATCACCGGG GAGGTGGTCT ACGTCTGCGC CGATCCGAAG ACGCAGAAAT CGGCGCCGAT CCCGGCATCG GTGCGGGAGC GGATCGAAGC GTGGGAGATT GTGAAGCCTG CTGCGTGA
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Protein sequence | MAKEDFHLSM PLRVRWAEVD PQSIVFNAHY LTYCDICSTE YWRAIGVRYP EDLLRAHGVD IFVIKSTLEY HASARFDEML DIRGRMARLG RSSMVFRVEM YRGDEHLITG EVVYVCADPK TQKSAPIPAS VRERIEAWEI VKPAA
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