Gene Rmet_1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1835 
Symbol 
ID4038637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1989435 
End bp1990331 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content67% 
IMG OID637977215 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_583983 
Protein GI94310773 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0566101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0670093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGGA ATATTGGCGT CATCGGCTTG GGCGCGATGG GCTACGGCGT GGCGCAGTCG 
CTGCTGCGCG CCGGCTTCAA CGTTCATGCA TTTGATTTGC GTGACGAGGT GCTGCGCCGC
TTCGCGGAAG CCGGTGGCAC GCCCTGCGGG AGCCCGGCCG AACTCGGCGA GCGTTGCGAC
GTGGTGATCA CGCTCGTCGT CAACGCCGCG CAGACGGAAA CCGTGCTGTT CGGCGACCAA
GGCGCCGCGT CGAAAATGGC GGCAGGCAAG CTCGTCATTG CCAGCGCCAC CGTGCCGCCC
GGATTTGCCG AAGCGCTCGG CAAGCGCCTG GGCGAACGTG GCCTGCTGAT GCTCGATGCC
CCCGTGTCGG GTGGCGCGGC GCGCGCGGCC AGCGGCGAGA TGACGATGAT GACCTCCGGT
CCCGCCGAGG CCTACGCCAT GGCCGAGGAC GTGCTGGCCG CGATGGCCGG CAAGGTCTAT
CGCCTGGGCG ACGCGCATGG CGCGGGCTCG AAGGTCAAGA TCATCAACCA GTTGCTGGCG
GGCGTGCATA TCGCCGCCGC AGCCGAAGCG ATGGCCCTGG GCCTGCGCGA AGGCGTGAAC
CCCGACGCGC TCTACGACGT GATCACGCAT AGCGCCGGCA ACTCGTGGAT GTTCGAGAAC
CGGGTGCCAC ACATCCTGGA AGGCGACTAC ACCCCGCTGT CCGCAGTGGA CATCTTCGTC
AAGGACCTCG GCATGGTGCT TGATACCGCG CGCACCAGCA AATTCCCGCT GCCGCTCTCG
GCCGCCGCGC ACCAGATGTT CATGATGGCG TCCACCGCCG GGCACGGCGG CGAAGACGAT
TCGGCCGTGA TCAAGATCTT CCCGGGCATC GACCTGCCCG GCCCGAAGGC CAGGTAA
 
Protein sequence
MSRNIGVIGL GAMGYGVAQS LLRAGFNVHA FDLRDEVLRR FAEAGGTPCG SPAELGERCD 
VVITLVVNAA QTETVLFGDQ GAASKMAAGK LVIASATVPP GFAEALGKRL GERGLLMLDA
PVSGGAARAA SGEMTMMTSG PAEAYAMAED VLAAMAGKVY RLGDAHGAGS KVKIINQLLA
GVHIAAAAEA MALGLREGVN PDALYDVITH SAGNSWMFEN RVPHILEGDY TPLSAVDIFV
KDLGMVLDTA RTSKFPLPLS AAAHQMFMMA STAGHGGEDD SAVIKIFPGI DLPGPKAR