Gene Rmet_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1834 
Symbol 
ID4038636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1988632 
End bp1989375 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content67% 
IMG OID637977214 
ProductGntR family transcriptional regulator 
Protein accessionYP_583982 
Protein GI94310772 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0450394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0643045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAAA AGATTCCTGC CCGTGCGCTG ACCGACAGCG TTGCCGAACA ACTGCTCGAG 
AAGATCGAGG ACGGCATGTT TCCGCGCGGC GCCAAGCTGC CCACCGAGGC CGTGCTCTCC
GAGGAGTTCG GCGTGAGCCG TACCGTGATC CGCGAGGCCA TCGCGCGACT CAAGTACGAA
GGCCTCGTGG AATCGCGCCA GGGTAGCGGC GTGTTCGTGA CCGAGCAGGC CGGCATCCGC
CCGCTGCGCA TCGACTACAC CGACGTGGGC ACGCTCGAGT CGGTGCTGCA GATCGTCGAA
CTGCGACGCT CGATCGAAGC CGAAGTGGCC GCGCAGGCCG CCCGGCGCCG TACCGACGCG
ACCATGGCCA ATATCGATGC CGCGCTGGCA CGCATCGACG CCGAAGTGGC CGCTGGCGGC
GATGGCGTCG ATGCTGACGT CGGCTTTCAT CGCGCCATCG CCGAAGCCAC CGGCAATCCG
TATTTCCTCA AGACACTGGC ATTCCTGAGC CAGTACCTGG AAACGGCCAC CCGCGTCACG
CGAACCAACG AAGCGCGGCG CGAGGATTTT TCGCGCCAGG TTCGGGAGGA GCACCAGGCC
ATTGTCGCCG CCATCCGCGC CGGCGACCCC GATGCCGCGC GCAACGCGGC CCAGAACCAC
ATGTACAACG CGGCGCGCCG GCTCTCCCAA CTGGGCGAGG ACGATTCCGC CGCTGGCCAC
CAGCCGGCAG GCCCGTCGCA CTAA
 
Protein sequence
MFQKIPARAL TDSVAEQLLE KIEDGMFPRG AKLPTEAVLS EEFGVSRTVI REAIARLKYE 
GLVESRQGSG VFVTEQAGIR PLRIDYTDVG TLESVLQIVE LRRSIEAEVA AQAARRRTDA
TMANIDAALA RIDAEVAAGG DGVDADVGFH RAIAEATGNP YFLKTLAFLS QYLETATRVT
RTNEARREDF SRQVREEHQA IVAAIRAGDP DAARNAAQNH MYNAARRLSQ LGEDDSAAGH
QPAGPSH