Gene Rmet_1832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1832 
Symbol 
ID4038634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1987133 
End bp1987987 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content66% 
IMG OID637977212 
Producthypothetical protein 
Protein accessionYP_583980 
Protein GI94310770 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00869889 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0643045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTCA TTCTGGTTGC CTGGCAATCT CACCCGGACT ACCCCCTGGT GGTTGCCGCC 
AACCGCGACG AATTCTATGC CCGCCCCGCC GCGCCCGCGG ACTGGTGGCG GGATGCCCCC
GGAGTGCTGG GTGGCCGTGA CCTCGCTGAG GTCATCGGTG ATGCCGGCAC ATGGATGGGT
ATTGCCGGCG CCCAGCACGG ACTGGACAGC CCTGTCGGCG CGCGGTTCGC CGCGCTGACC
AACTATCGCG CGCCTTCGGA AAAACGTACC GATGCCCGCT CGCGCGGCGA GCTGGTGGCG
CATTTCCTGC GCGGCGATCA GACGCCGGCC GACTATCTGC ACGACCTGGC CGGGGACCAC
GGCGCCTACA ACGGCTTCAA CCTGCTGACC AGCGATCTGC ATGACCTCTG GTGGTACAGC
AACCGTTCGA AGTCCCGCGT GCCGCAGCGG CTCACGCCGG GCCTGTATGG CTTGTCAAAT
GCGCTCCTCG ACACGCCCTG GCCCAAAGTG CGCAGCCGCG TGGGCGCGAT GTGCGAAGTC
CTGGCAGCCG ATCGCGGCCA GATCGGATCG AACGTGGAGT CGTATCTGCA GTTGCTTGCG
GACGATCGGC AGGCGCCCGA CTGGGAACTG CCGAGCACGG GCGTCGCACC CGAATGGGAA
AAGCTGCTGT CATCCGCATT CATCCGTTCG CCGAACTACG GCACGCGTGC CAGCACCGTG
CTGCGCGTCA TGCATGACGG CCGCTTCGAC TTCGTCGAAC GCAGCTTCGA TGCCGATGGC
CAGACCGGTG AGGTCTCCTA TCGCGGACGA CTCAATCTGG CGCGCGACAC CGGCACAGTA
CCCGCGCCGC GCTGA
 
Protein sequence
MCLILVAWQS HPDYPLVVAA NRDEFYARPA APADWWRDAP GVLGGRDLAE VIGDAGTWMG 
IAGAQHGLDS PVGARFAALT NYRAPSEKRT DARSRGELVA HFLRGDQTPA DYLHDLAGDH
GAYNGFNLLT SDLHDLWWYS NRSKSRVPQR LTPGLYGLSN ALLDTPWPKV RSRVGAMCEV
LAADRGQIGS NVESYLQLLA DDRQAPDWEL PSTGVAPEWE KLLSSAFIRS PNYGTRASTV
LRVMHDGRFD FVERSFDADG QTGEVSYRGR LNLARDTGTV PAPR