| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1825 |
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| Symbol | |
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| ID | 4038627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1981363 |
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| End bp | 1982160 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637977205 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_583973 |
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| Protein GI | 94310763 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0332643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00471039 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTGTTG ATTCCCACTG CCATATCGAT TTTCCCGAGC TGGCCGAAAG GCTGCCGCAG
TTGCTCGAGA ACATGCGGAC CAATCAGGTG TCGCACGCCC TCTGCATCTC GGTGACGCTC
GAGGACTTTC CGCGCGTGCT GGCGCTGGCC GAACAGCATC CGAACCTGTA TGCCTCAGTC
GGCGTGCATC CTGACTACGA GGAAGGCGCC GAAGAACCGA CACTCGAGCG GCTGGTCACG
CTGTCGGCGC ATCCGCGAGT GGTTGGTACC GGCGAGACCG GGCTGGACTA CTACCGTCTC
AATGGTCGCA GCATCGCGGA GATGGAGTGG CAGCGTGAGC GGTTCCGCAC CCATATCCGC
GCGGCCCGCC AGACTGGCAA GCCGCTGATC ATCCATACGC GATCCTCGGC GGACGACACG
CTGCGGCTGA TGCGCGAGGA AAACGCAGGT GAGGTTGGCG GCGTCATGCA CTGCTTCACG
GAGACCTGGG ACATCGCCCG GCAGGCGCTG GACGAAGGCT TCCATATTTC GTTCTCGGGT
ATCGTCACGT TCAAGAGCGC GGCTGACCTG CAAGAAACCG CGAAGAAGGT ACCGCTCGAC
CGCATGCTGA TCGAAACCGA TTCGCCTTAT CTTGCCCCGG TGCCGTACCG CGGCAAGACG
AACGAGCCGG CCTGGGTGCG TCACGTGGGC GAGTTCATCG CCAAGCTGCG CGATGTTCCC
GTGGAGACGA TCGCAGAACA AACTACAGAT AATTTTTTCC GCTTATTCAA GCACATAGAC
AGGAATTCTC ATGCTTGA
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| Protein sequence | MFVDSHCHID FPELAERLPQ LLENMRTNQV SHALCISVTL EDFPRVLALA EQHPNLYASV
GVHPDYEEGA EEPTLERLVT LSAHPRVVGT GETGLDYYRL NGRSIAEMEW QRERFRTHIR
AARQTGKPLI IHTRSSADDT LRLMREENAG EVGGVMHCFT ETWDIARQAL DEGFHISFSG
IVTFKSAADL QETAKKVPLD RMLIETDSPY LAPVPYRGKT NEPAWVRHVG EFIAKLRDVP
VETIAEQTTD NFFRLFKHID RNSHA
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