Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1822 |
Symbol | |
ID | 4038624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1978062 |
End bp | 1979249 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637977202 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_583970 |
Protein GI | 94310760 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.248214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0148052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAGAA GAATCAAGGC GGAACAGCTT CAGGTGGGCA TGTTTGTGTC CAGGCTGGGC GGGCCATGGA TCAACCATCC ATTCTGGCGC TCGCGCTTTC TGGTCAGTAG CGACGAACAG ATCGAGCAGA TCCTGGCGGC CAATGTGCAG GACGTCTGGA TCGACATCCT GAAGGGGCGC AACCTGCCGA TGCAGAGCAC GCCGGAAGTT GCCGATTCGG AGGTGGATGC ACAGCCCGAG TCGGGTTTCG AGGACGAACT CGAACATGCG CGCGAGCTGA TCAAGTCGGG CCGGGCGGTG ATCGGGTCGA TTTTCAACGA CGTGCGGATG GGGCACGCGC TCGAGACCAA CGGCGCGCTG CTGCTGGTGG ATTCGGCATC GACATCGCTT TCGCGCCATT CGCAGGCGTT GCTGGCCATG GCACGGCTCA AGGCCAAGGA CGACTACACG TACCTGCATT CGTACTCGGT CTGTGCGCTG ATGATCGCCG TGGGCCGTAC GCTGAAACTG CCCGACGGTG AAGTGCGCGA GCTTGGCCTG GCCGGGCTGG TCCACGATAT CGGCAAGCTG ACGCTGCCCG AGTCACTGCT GATGAAGGCG GGGGATCTGT CGCCGGCCGA GTACGAGCAG ATGCGGCGGC ACCCGTCGGC CGGGTACCGC ATCCTGAACG AGGCGCGGCT GTATACGAAC ATTCCGCTCG ACGTGTGCGT GCATCACCAT GAGCGGGTGG ACGGCAAGGG CTATCCCTTC GGTCTGTTCG AGAGTGAAAT CAGCGTGCAC GCCAAGATCG CGGCGATCTG CGATACCTAC GACTCGCTGA CGTCGCCGCG GCCCAACCAC CTGGCCTGGT CACCGGCGCG TGCGATGGAG TACATCGCGG TGCGCGTCGA CACGCTGTTC GATCGCCGTG TGTTCAAGGC GTTTACACGG ACGGTCGGCA TCTACCCGCT GGGCACCGTG CTGCGGCTGC GCTCGGGACG CCTGGCGGTG GTCTGCGGGC AGAACGCGAA CGAACCGCTG CGGCCCCGCG TGATGACGTT CTACTCGGTG TCACAGTCGG CGCCGCTGCC GCATGAGGTT CTCGACCTGA CTCAGAGCGA GGATTCCGTC ATTGCCTTCG AGGATGCCCG GCAGTGGGGT TTCACCGACG AGCAACTGAT GGCGATGTAC GCGCCACACG TGAAATAG
|
Protein sequence | MLRRIKAEQL QVGMFVSRLG GPWINHPFWR SRFLVSSDEQ IEQILAANVQ DVWIDILKGR NLPMQSTPEV ADSEVDAQPE SGFEDELEHA RELIKSGRAV IGSIFNDVRM GHALETNGAL LLVDSASTSL SRHSQALLAM ARLKAKDDYT YLHSYSVCAL MIAVGRTLKL PDGEVRELGL AGLVHDIGKL TLPESLLMKA GDLSPAEYEQ MRRHPSAGYR ILNEARLYTN IPLDVCVHHH ERVDGKGYPF GLFESEISVH AKIAAICDTY DSLTSPRPNH LAWSPARAME YIAVRVDTLF DRRVFKAFTR TVGIYPLGTV LRLRSGRLAV VCGQNANEPL RPRVMTFYSV SQSAPLPHEV LDLTQSEDSV IAFEDARQWG FTDEQLMAMY APHVK
|
| |