Gene Rmet_1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1822 
Symbol 
ID4038624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1978062 
End bp1979249 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content63% 
IMG OID637977202 
Productmetal dependent phosphohydrolase 
Protein accessionYP_583970 
Protein GI94310760 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.248214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0148052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGAA GAATCAAGGC GGAACAGCTT CAGGTGGGCA TGTTTGTGTC CAGGCTGGGC 
GGGCCATGGA TCAACCATCC ATTCTGGCGC TCGCGCTTTC TGGTCAGTAG CGACGAACAG
ATCGAGCAGA TCCTGGCGGC CAATGTGCAG GACGTCTGGA TCGACATCCT GAAGGGGCGC
AACCTGCCGA TGCAGAGCAC GCCGGAAGTT GCCGATTCGG AGGTGGATGC ACAGCCCGAG
TCGGGTTTCG AGGACGAACT CGAACATGCG CGCGAGCTGA TCAAGTCGGG CCGGGCGGTG
ATCGGGTCGA TTTTCAACGA CGTGCGGATG GGGCACGCGC TCGAGACCAA CGGCGCGCTG
CTGCTGGTGG ATTCGGCATC GACATCGCTT TCGCGCCATT CGCAGGCGTT GCTGGCCATG
GCACGGCTCA AGGCCAAGGA CGACTACACG TACCTGCATT CGTACTCGGT CTGTGCGCTG
ATGATCGCCG TGGGCCGTAC GCTGAAACTG CCCGACGGTG AAGTGCGCGA GCTTGGCCTG
GCCGGGCTGG TCCACGATAT CGGCAAGCTG ACGCTGCCCG AGTCACTGCT GATGAAGGCG
GGGGATCTGT CGCCGGCCGA GTACGAGCAG ATGCGGCGGC ACCCGTCGGC CGGGTACCGC
ATCCTGAACG AGGCGCGGCT GTATACGAAC ATTCCGCTCG ACGTGTGCGT GCATCACCAT
GAGCGGGTGG ACGGCAAGGG CTATCCCTTC GGTCTGTTCG AGAGTGAAAT CAGCGTGCAC
GCCAAGATCG CGGCGATCTG CGATACCTAC GACTCGCTGA CGTCGCCGCG GCCCAACCAC
CTGGCCTGGT CACCGGCGCG TGCGATGGAG TACATCGCGG TGCGCGTCGA CACGCTGTTC
GATCGCCGTG TGTTCAAGGC GTTTACACGG ACGGTCGGCA TCTACCCGCT GGGCACCGTG
CTGCGGCTGC GCTCGGGACG CCTGGCGGTG GTCTGCGGGC AGAACGCGAA CGAACCGCTG
CGGCCCCGCG TGATGACGTT CTACTCGGTG TCACAGTCGG CGCCGCTGCC GCATGAGGTT
CTCGACCTGA CTCAGAGCGA GGATTCCGTC ATTGCCTTCG AGGATGCCCG GCAGTGGGGT
TTCACCGACG AGCAACTGAT GGCGATGTAC GCGCCACACG TGAAATAG
 
Protein sequence
MLRRIKAEQL QVGMFVSRLG GPWINHPFWR SRFLVSSDEQ IEQILAANVQ DVWIDILKGR 
NLPMQSTPEV ADSEVDAQPE SGFEDELEHA RELIKSGRAV IGSIFNDVRM GHALETNGAL
LLVDSASTSL SRHSQALLAM ARLKAKDDYT YLHSYSVCAL MIAVGRTLKL PDGEVRELGL
AGLVHDIGKL TLPESLLMKA GDLSPAEYEQ MRRHPSAGYR ILNEARLYTN IPLDVCVHHH
ERVDGKGYPF GLFESEISVH AKIAAICDTY DSLTSPRPNH LAWSPARAME YIAVRVDTLF
DRRVFKAFTR TVGIYPLGTV LRLRSGRLAV VCGQNANEPL RPRVMTFYSV SQSAPLPHEV
LDLTQSEDSV IAFEDARQWG FTDEQLMAMY APHVK