Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1817 |
Symbol | |
ID | 4038619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1971205 |
End bp | 1971987 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637977197 |
Product | IclR family transcriptional regulator |
Protein accession | YP_583965 |
Protein GI | 94310755 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0109987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0137761 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACGC GCCCCCATCA CCCCGATCCC GCCTTTGCCA CCACGCTGGC CCACGGCCTG GCGTTGCTGC AGTGCTTTCG CGTGGGCGAG ACCGTGCTCG GCAATAAGGA ACTGGCCGAT CGCACCGGTC TGTCGAAAGC GACCATCAGC CGGCTGACCT ACACGCTGGC GGCGCGCGGA TTGCTGCTCT ACGACACCCA TTTGCGCCGC TACCGGCTGG GCTCGACCGC GCTCTCGCTT GGGTATCCAC TGCTGGCCAG CCTGCGCGTG CGGCAGCTGG CCCGGCCGCT CATGAAAGCG CTGGCCGATC AGGTTGGCGG CTCCGTATCG CTGGGGCTGC GCGACCGGCT GCGCATGGTC TACGTCGAAA CCAGCCGGGG TCACGACGCG ATCGCATTTC GTCCGGACAT CGGCGCATCC CTGCCGATGC TGGCCACGGC GATGGGCCGG GCATGGCTGG CATGGGCACC GGAAGACGTG CGCCACCGCC TGCTCGACGC GCTGCGAGAG GCCGAGCCGG ACGACTACGA ACGGCTGGCG GGTGCCGTGG ATACGGCCAT CGAGGAGTTG GCGACACTCG GCTTTACGCG GTCACGTGGC GACTGGCAGC GCGACGTTCA CGCCGTGGCC GTGCCGATGC GGACTCCCAT CGACGGCGAG ATCCTGGTCT TCAACTGCGG CGTGCCCGCG GTGCGCATGA CGCCCCGGAA GCTCGAACGC GAGATGGGGC CGCGCCTGCT GAAGCTGGTG GCGCAGGTGG AAACACTGGT GGCCTGGGAG TGA
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Protein sequence | MPTRPHHPDP AFATTLAHGL ALLQCFRVGE TVLGNKELAD RTGLSKATIS RLTYTLAARG LLLYDTHLRR YRLGSTALSL GYPLLASLRV RQLARPLMKA LADQVGGSVS LGLRDRLRMV YVETSRGHDA IAFRPDIGAS LPMLATAMGR AWLAWAPEDV RHRLLDALRE AEPDDYERLA GAVDTAIEEL ATLGFTRSRG DWQRDVHAVA VPMRTPIDGE ILVFNCGVPA VRMTPRKLER EMGPRLLKLV AQVETLVAWE
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