Gene Rmet_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1817 
Symbol 
ID4038619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1971205 
End bp1971987 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID637977197 
ProductIclR family transcriptional regulator 
Protein accessionYP_583965 
Protein GI94310755 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0109987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0137761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACGC GCCCCCATCA CCCCGATCCC GCCTTTGCCA CCACGCTGGC CCACGGCCTG 
GCGTTGCTGC AGTGCTTTCG CGTGGGCGAG ACCGTGCTCG GCAATAAGGA ACTGGCCGAT
CGCACCGGTC TGTCGAAAGC GACCATCAGC CGGCTGACCT ACACGCTGGC GGCGCGCGGA
TTGCTGCTCT ACGACACCCA TTTGCGCCGC TACCGGCTGG GCTCGACCGC GCTCTCGCTT
GGGTATCCAC TGCTGGCCAG CCTGCGCGTG CGGCAGCTGG CCCGGCCGCT CATGAAAGCG
CTGGCCGATC AGGTTGGCGG CTCCGTATCG CTGGGGCTGC GCGACCGGCT GCGCATGGTC
TACGTCGAAA CCAGCCGGGG TCACGACGCG ATCGCATTTC GTCCGGACAT CGGCGCATCC
CTGCCGATGC TGGCCACGGC GATGGGCCGG GCATGGCTGG CATGGGCACC GGAAGACGTG
CGCCACCGCC TGCTCGACGC GCTGCGAGAG GCCGAGCCGG ACGACTACGA ACGGCTGGCG
GGTGCCGTGG ATACGGCCAT CGAGGAGTTG GCGACACTCG GCTTTACGCG GTCACGTGGC
GACTGGCAGC GCGACGTTCA CGCCGTGGCC GTGCCGATGC GGACTCCCAT CGACGGCGAG
ATCCTGGTCT TCAACTGCGG CGTGCCCGCG GTGCGCATGA CGCCCCGGAA GCTCGAACGC
GAGATGGGGC CGCGCCTGCT GAAGCTGGTG GCGCAGGTGG AAACACTGGT GGCCTGGGAG
TGA
 
Protein sequence
MPTRPHHPDP AFATTLAHGL ALLQCFRVGE TVLGNKELAD RTGLSKATIS RLTYTLAARG 
LLLYDTHLRR YRLGSTALSL GYPLLASLRV RQLARPLMKA LADQVGGSVS LGLRDRLRMV
YVETSRGHDA IAFRPDIGAS LPMLATAMGR AWLAWAPEDV RHRLLDALRE AEPDDYERLA
GAVDTAIEEL ATLGFTRSRG DWQRDVHAVA VPMRTPIDGE ILVFNCGVPA VRMTPRKLER
EMGPRLLKLV AQVETLVAWE