Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1815 |
Symbol | |
ID | 4038617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1968868 |
End bp | 1969845 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637977195 |
Product | hypothetical protein |
Protein accession | YP_583963 |
Protein GI | 94310753 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00540737 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0160042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGC CCTTGATCGC GGCGGCCGGC ATGTCGTTCG GCCTGTTTTT CGGCATGGCC CCGGCGCACG CCGAGACCCC TTATCCGAAC AAGGTGATCA GGCTGGTGGT GCCGTTCGCG CCGGGCGGGT CCACCGATAT CGTCGCCCGG CTGATTTCCG AGCCGCTGCG CGACGAACTG GGCCAGACGG TAATCGTCGA CAACCGGCCG GGCGCGGGTG GCAATATCGG CGGCGACATC GTCGCCAAGG CGGCGCCGGA CGGCTACACG CTGCTGCTGG CCGCCGCCGG GCCGACCGTC ATCAATCCGA GCCTCTACCC GAAGATGTCC TACGATCCGG TGCGCGATCT GGCGCCGGTG ACGATGATCG AGCGCGAGCA CAACGTGATG GCGGTCAATG CGTCGCTGCC GGTCAAGAAC GTGCAGGAGT TCATTGCCTA CGCCAAGTCG CACCCGAACC AGCTTTCGTT CGGATCGCCG GGCAACGGCA GCCCCGCGCA ACTGGCCGGG GAACTGTTGA ACCAGACCGC GGGCATCAAG CTCCAGCACG TGCCATACAA GGGTAGCGGC CCGGCCGTGG CAGACCTGAT CGCTGGCCAT ATCACACTGC TGATCGACAA TATGCCGGCG CTCTGGCCGC ACGTTCAGTC GGGCAAGCTG CGCGCGCTGG CTGTGACCAG CGAAAAACGC GCTACGGCGG CGCCGGGCCT GCCGACGGCA CAGGAAGCCG GGCTCAAGGG CTATGTCGTG ACCGCTTGGA AAGGCCTGAT GGTGCCTGCG CATACCCCGC GTCCGGTCGT CGACAAGCTT AACCAGGCGA TGGTGAAGAT TCTGGCGCGG CCCGAACTGC GCAAGAAGCT GGTGGAACTG GGCGCGGAGC CGGTGGGCGA TACGCCCGAG CAGTTCGGAC AACAGATTCG TGCCGATGCG GCGTGGTGGG CCGCACTGGT CAAGTCCACC GGCACCACGC TGGAATGA
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Protein sequence | MIKPLIAAAG MSFGLFFGMA PAHAETPYPN KVIRLVVPFA PGGSTDIVAR LISEPLRDEL GQTVIVDNRP GAGGNIGGDI VAKAAPDGYT LLLAAAGPTV INPSLYPKMS YDPVRDLAPV TMIEREHNVM AVNASLPVKN VQEFIAYAKS HPNQLSFGSP GNGSPAQLAG ELLNQTAGIK LQHVPYKGSG PAVADLIAGH ITLLIDNMPA LWPHVQSGKL RALAVTSEKR ATAAPGLPTA QEAGLKGYVV TAWKGLMVPA HTPRPVVDKL NQAMVKILAR PELRKKLVEL GAEPVGDTPE QFGQQIRADA AWWAALVKST GTTLE
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