Gene Rmet_1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1815 
Symbol 
ID4038617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1968868 
End bp1969845 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID637977195 
Producthypothetical protein 
Protein accessionYP_583963 
Protein GI94310753 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00540737 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0160042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC CCTTGATCGC GGCGGCCGGC ATGTCGTTCG GCCTGTTTTT CGGCATGGCC 
CCGGCGCACG CCGAGACCCC TTATCCGAAC AAGGTGATCA GGCTGGTGGT GCCGTTCGCG
CCGGGCGGGT CCACCGATAT CGTCGCCCGG CTGATTTCCG AGCCGCTGCG CGACGAACTG
GGCCAGACGG TAATCGTCGA CAACCGGCCG GGCGCGGGTG GCAATATCGG CGGCGACATC
GTCGCCAAGG CGGCGCCGGA CGGCTACACG CTGCTGCTGG CCGCCGCCGG GCCGACCGTC
ATCAATCCGA GCCTCTACCC GAAGATGTCC TACGATCCGG TGCGCGATCT GGCGCCGGTG
ACGATGATCG AGCGCGAGCA CAACGTGATG GCGGTCAATG CGTCGCTGCC GGTCAAGAAC
GTGCAGGAGT TCATTGCCTA CGCCAAGTCG CACCCGAACC AGCTTTCGTT CGGATCGCCG
GGCAACGGCA GCCCCGCGCA ACTGGCCGGG GAACTGTTGA ACCAGACCGC GGGCATCAAG
CTCCAGCACG TGCCATACAA GGGTAGCGGC CCGGCCGTGG CAGACCTGAT CGCTGGCCAT
ATCACACTGC TGATCGACAA TATGCCGGCG CTCTGGCCGC ACGTTCAGTC GGGCAAGCTG
CGCGCGCTGG CTGTGACCAG CGAAAAACGC GCTACGGCGG CGCCGGGCCT GCCGACGGCA
CAGGAAGCCG GGCTCAAGGG CTATGTCGTG ACCGCTTGGA AAGGCCTGAT GGTGCCTGCG
CATACCCCGC GTCCGGTCGT CGACAAGCTT AACCAGGCGA TGGTGAAGAT TCTGGCGCGG
CCCGAACTGC GCAAGAAGCT GGTGGAACTG GGCGCGGAGC CGGTGGGCGA TACGCCCGAG
CAGTTCGGAC AACAGATTCG TGCCGATGCG GCGTGGTGGG CCGCACTGGT CAAGTCCACC
GGCACCACGC TGGAATGA
 
Protein sequence
MIKPLIAAAG MSFGLFFGMA PAHAETPYPN KVIRLVVPFA PGGSTDIVAR LISEPLRDEL 
GQTVIVDNRP GAGGNIGGDI VAKAAPDGYT LLLAAAGPTV INPSLYPKMS YDPVRDLAPV
TMIEREHNVM AVNASLPVKN VQEFIAYAKS HPNQLSFGSP GNGSPAQLAG ELLNQTAGIK
LQHVPYKGSG PAVADLIAGH ITLLIDNMPA LWPHVQSGKL RALAVTSEKR ATAAPGLPTA
QEAGLKGYVV TAWKGLMVPA HTPRPVVDKL NQAMVKILAR PELRKKLVEL GAEPVGDTPE
QFGQQIRADA AWWAALVKST GTTLE