| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1813 |
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| Symbol | |
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| ID | 4038615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1966449 |
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| End bp | 1967669 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637977193 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_583961 |
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| Protein GI | 94310751 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.542825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0368115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCG AAGCAGAACA ACCCGGTGGC CCGCTGGCCG GGGTACGCAT CCTCGACATG
GCCACCGTCA TCGCCGCGCC GTTTTCCAGC ACGCTGTGCG CGGACATGGG CGCAGACGTC
GTCAAACTCG AACTGCCCGA TGGGAGCGAC CCGCTGCGCG GGCTGGCTCC GGTCAAGGGC
GATCTGGCGC TGTACTGGAA GGTGACCAAT CGCGGCAAGC GCGGTATCAC GCTGGACGTG
CGCAAGCCGG CCGGGCGCGC ATTGTTCCTG CGGATGCTGC CGGACTTCGA CGTGCTCGTG
GAGAACTTCC GGACCGGTAC GCTTGATCGC TGGGGGCTCG ATATCGACAC GCTGCGGCGT
GCCAATCCGC GTCTGGTCGT GCTGCGCCTG ACCGGCTTCG GGCAGACCGG CCCCTACGCA
CAGCGCGCCG GGTTTGCGCG GATCTTCGAG GCGATGAGCG GCTTCACGAA CCTGACCGGC
GAGACGGGCG GGGCGCCGCT GCATATGAAC TACCCGATGG GTGACATGGT GGCCGGCCTG
TTCGGCGCGT TCGCGATTGC CAGCGCCATC GCCGAACGTC GCCGGCCTGG CAACGAGACC
ATGCCGGGCC AGGAAATCGA CCTGGCCGCC ACCGAGGCGC TGTTCCGGTT GCTGGAGCCG
CTGGCGGTCG AGTACGAGCA GCTTGGCCAG GTCCGCCAGC GCGCGGGCAA TCGCGCCACG
TATACCGCGC CGTCGAACAT GTATGCCACG GCCGATGGCC AGTGGGTATC GCTGGTGGCA
TCGTCGGGCC CGATCTTCCG GCGCCTGTGT CAGGCGATCG GGCAGCCGGG CGTGGCCGAC
GACCCGCGCT TCGCCACCAA CCCGTCGCGG GTGCGCCATC TGGACGCGCT CGATGAAGTC
GTCGCCAGGT GGTTCGGCAG CCATGCCTAT GCGGATGTGG CAAGCACCCT CGAGGCGCAC
GAGATTCCGT TCAGCAAGAT TTTCTCGATC GCCGATATCG TCGACGATCC GCACTTTCAG
GAACGGCAGG CGATCGTCAG GCTGCCCGAT CCGGACCTGG GCTCGATCCC GGCACCCTGC
GTGGTGCCAA GGTTCGCCGG ACACACCCCA CCGCCAGCCA GGAGCGGGCC GGGGGTCGGC
GAGCACAATG CGGAAGTCTA CGGCGCGTTG GGACTGACGG CCGCCGACCT GACCGGGCTG
CGCGAGGGCG GGGTGATCTA G
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| Protein sequence | MNPEAEQPGG PLAGVRILDM ATVIAAPFSS TLCADMGADV VKLELPDGSD PLRGLAPVKG
DLALYWKVTN RGKRGITLDV RKPAGRALFL RMLPDFDVLV ENFRTGTLDR WGLDIDTLRR
ANPRLVVLRL TGFGQTGPYA QRAGFARIFE AMSGFTNLTG ETGGAPLHMN YPMGDMVAGL
FGAFAIASAI AERRRPGNET MPGQEIDLAA TEALFRLLEP LAVEYEQLGQ VRQRAGNRAT
YTAPSNMYAT ADGQWVSLVA SSGPIFRRLC QAIGQPGVAD DPRFATNPSR VRHLDALDEV
VARWFGSHAY ADVASTLEAH EIPFSKIFSI ADIVDDPHFQ ERQAIVRLPD PDLGSIPAPC
VVPRFAGHTP PPARSGPGVG EHNAEVYGAL GLTAADLTGL REGGVI
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