Gene Rmet_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1807 
Symbol 
ID4038609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1958681 
End bp1959436 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content64% 
IMG OID637977187 
ProductrfbF; ADP-glucose pyrophosphorylase 
Protein accessionYP_583955 
Protein GI94310745 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1213] Predicted sugar nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.191256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.13446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCAA TCATTCTTGC CGCGGGCCTC GGCCTGCGAC TTCAGCAACA GCCGGGCAAG 
CAGTTCCCGA AGTGCCTGTT GCGTTTTGAC GGCGTCACGC TGCTCGAGCG TCATCTGCGT
ATGCTCGATG CCGCCGGCGT GACCGAAGTC GTGCTCGCGC TCGGCTTCGA GCCGGAACAG
GTGCAGGCCG AGCTGGCCCG CCTGAACCGC TCGGCCGAAA TCGTGATCAA TCCCCGCTAC
GACCTGGGCA GCGTGCTGAC CGTGCACACC GCGGCGGATG CCATGACGCG CGGTGGCGAC
GTGCTGCTGA TGGACGCCGA CGTGCTCTAT GACGAGCGCA TCATGAGCAA GCTCGTGGCC
GGCGAGACCG TCAACCGCCT GCTGATCGAC CGCGATTTCG AGGCTGGCGA CGAGCCCGTC
AAGCTGTGTC TGAAGGATGG CGTGCCCGTG GAACTGCGCA AGCAGCTCAT GGCCGATCTC
TCGTATGACA CGATCGGCGA ATCGGTCGGC TTCTTCCGTT TCAAGCAGGA CTGCGCCCAA
CGTCTGGCCG AAATCGTCAA GGGCTATGTC GATGGCGGCC GCGCCAACAT GCCGCACGAA
GAAGCGGTGC GCGACCTGCT GCTGGAACGC TCCCACACAT TCGATACCGC TGACGTCACC
GGCGCGCCCT GGATCGAGAT CGATTTCCCG GGCGATGTGG CCCGTGCCGC CGAAGAAGTC
CTGCCCCAAC TGCAGCCCGT AGGAATCGCC CAATGA
 
Protein sequence
MRAIILAAGL GLRLQQQPGK QFPKCLLRFD GVTLLERHLR MLDAAGVTEV VLALGFEPEQ 
VQAELARLNR SAEIVINPRY DLGSVLTVHT AADAMTRGGD VLLMDADVLY DERIMSKLVA
GETVNRLLID RDFEAGDEPV KLCLKDGVPV ELRKQLMADL SYDTIGESVG FFRFKQDCAQ
RLAEIVKGYV DGGRANMPHE EAVRDLLLER SHTFDTADVT GAPWIEIDFP GDVARAAEEV
LPQLQPVGIA Q