Gene Rmet_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1801 
Symbol 
ID4038603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1953174 
End bp1954205 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content67% 
IMG OID637977181 
Producthypothetical protein 
Protein accessionYP_583949 
Protein GI94310739 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.939675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.361643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGT CCCAGCCCCT GCATCTGCCG GCCCTGCTGC GCCGCCTGTG CGCGACGATC 
GGCGCCGCCA CCGTCGTGAC TGCCGTGACT GCCGTTTGCA CCCTGACCCT GCCCGCCGCC
CATGCCCAAA GCGACAAACC GATCCGCATC CTGGTGGGAT ACCCGGCGGG TGGCACGGCC
GATCTGGCGG CACGGCTGGT CGGCGACAAG CTGCGCGAGG AGCTAAAGCA GACCGTGGTC
ATCGAGAACA AGCCCGGCGC GGGTGGCCGG CTGGTCATGG ACTATGCGAA ATCGCAGGCC
GGCGACGGCA ACACCATCGT ACTGGCCAAC TCGGCGGTGA TGACCATCGC GCCGCTCGTC
TACCGCAAGC TCAACTACGA CGTCGCGCGC GATTTCACGC CAGTGGCGCA GGTGGCCAAT
TTCCAGCTTG CGCTGGCAAC CGGACCGGGC ACGCCGGCTA AATCCTTCAA GGATTATGTG
GCCTGGCTCA AGACCAATTC GGTCGATTCG ACCCATGCAG CCTACGCCTC GCCCGCACTC
GGCAGCATTC CCCACTTCTT CGGACTGATG ATCGGCAAGC AGGTTGGCGT GTCGATGCTG
CACGTGCCGT TCAACGGTTC CGCGCCGCTG ATGACCGCGC TGATCGGCGG TCAGGTGCCG
GCATCGGTGG ATACGCTGGC CGATCTGACC GAAATGCATC GCGCCGGCAA GATCCACGTA
CTGGCCACCT CGGGCACGCG CCGCTCGGCC GCCCTGCCCG ACGTGCCGAC GTTTACCGAG
CTCGGCTACA AGGACATCGA AGGCGTGGGC CGCTACGGCT TCATCGCCCC GGCGGGCACC
TCGCGCGCCA CGATCGACCG GCTCAATGCC GCCGTCGCGC ACGCCATTGC GTCGCCCGAC
CTCCAGCAGA AATTCCTCAA GCTCGGGCTC GAACCGCAGA GCGGCAGCGC CGACGCCTTC
GCTGCCGTGC TGGCCGGCGA CGCCACTCGC TGGGGTCCGG TGGTCAAAGC GTCGGGCTAC
GTCGGCGACT GA
 
Protein sequence
MSLSQPLHLP ALLRRLCATI GAATVVTAVT AVCTLTLPAA HAQSDKPIRI LVGYPAGGTA 
DLAARLVGDK LREELKQTVV IENKPGAGGR LVMDYAKSQA GDGNTIVLAN SAVMTIAPLV
YRKLNYDVAR DFTPVAQVAN FQLALATGPG TPAKSFKDYV AWLKTNSVDS THAAYASPAL
GSIPHFFGLM IGKQVGVSML HVPFNGSAPL MTALIGGQVP ASVDTLADLT EMHRAGKIHV
LATSGTRRSA ALPDVPTFTE LGYKDIEGVG RYGFIAPAGT SRATIDRLNA AVAHAIASPD
LQQKFLKLGL EPQSGSADAF AAVLAGDATR WGPVVKASGY VGD