Gene Rmet_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1800 
Symbol 
ID4038602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1952517 
End bp1953068 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content67% 
IMG OID637977180 
ProductMarR family transcriptional regulator 
Protein accessionYP_583948 
Protein GI94310738 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.79218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.50534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGG AAACTTCAGG CACCTTGCAG GCGCCGGGCC GGCTGGTCGA CTTCATCAAT 
TACCGTCTCT ATCACCTGAG CCGCGTGGCG ATGGCCGCGA GCGGCTTGCA TCTGCGGGCC
GCAGCGGGCG TCAGTCGCCG CGAGTGGCGG ATGCTGGCAT TCCTCGGTGA ACAGCCAGGC
ACCCGGCTGA CCGAACTGGC AGCCAGCGCG GGGCTCGACA AGGTGCTGGC CAGCCGCGCG
GTGCATGGCC TGATTGACAA GGGATTGGTA CGCCGGGATT CGCGCGAGGG CGACCGGCGC
GCGGCAGCCT TCAGGCTGAC TGAAGCGGGC GAGTCGGTGT ACGCGGCGGC CTTCGCGCGG
GCGCGCGATT TCAATCGGGA ATTGGCGGGC TGCCTGAATG AGGATGAGGC GGAGATGTTC
TCGCGCTGCC TGGACAAACT CCATGCGCAG GCCATGACGA TGCTGCTGGC GGCGAAACCC
CTGGCGGACA GGTCCGATGC CGCCGATGCG CCGGCGTTCG AAGATCCGCT GAACGTGTGG
CGGAAGCGCT AA
 
Protein sequence
MAQETSGTLQ APGRLVDFIN YRLYHLSRVA MAASGLHLRA AAGVSRREWR MLAFLGEQPG 
TRLTELAASA GLDKVLASRA VHGLIDKGLV RRDSREGDRR AAAFRLTEAG ESVYAAAFAR
ARDFNRELAG CLNEDEAEMF SRCLDKLHAQ AMTMLLAAKP LADRSDAADA PAFEDPLNVW
RKR