Gene Rmet_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1772 
Symbol 
ID4038574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1924221 
End bp1924787 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content65% 
IMG OID637977152 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_583920 
Protein GI94310710 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0639273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.595385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGA GCCATCACCC TATGCAAGCC ACAGCCCCGA CGTTGCCCAC CTGTGTGACC 
CTGCGAAACG GCAAGCAGGT GCTGATACGA ACGATCCGCC CGCAGGACAA AGGCGGCATC
CTGACGGCCT TCCATCGCCT GTCTGATGAC TCGCGGTATA CGCGATTCAT GGCGTCCATG
CACGACCTGC CAGACGCGTT GCTGGAAACG GCCGTTCACC CGACGCCGGT CCGCGAATGC
GCGCTGGTCG CCATGGCGGG GACGGAGGAC AAGGGTGATC TGATTGGCGG CGCCCGCTTC
ACGATCGACC CGCACTCCGG ATCCTGCGAA TTCGCGGTGA CAATCGTCGA CGGCTGGCAT
GGTCTTGGCC TGGCGCGCCA TCTCATGGAG ATCCTGATCG CGACGGCACG GGCCGCCGGA
TACCACACGA TGATTGGCTA CGTGCTGGCA TCCAATACCG CGATGCGCGG CCTGGCGCAT
CGGCTGGGTT TCACGGACAC GATGTGCCCC GACGACGCCA CCTTGCGCGT GGTCTCCCTG
GATCTCACCG CATCTCCCGC GCCCTGA
 
Protein sequence
MEPSHHPMQA TAPTLPTCVT LRNGKQVLIR TIRPQDKGGI LTAFHRLSDD SRYTRFMASM 
HDLPDALLET AVHPTPVREC ALVAMAGTED KGDLIGGARF TIDPHSGSCE FAVTIVDGWH
GLGLARHLME ILIATARAAG YHTMIGYVLA SNTAMRGLAH RLGFTDTMCP DDATLRVVSL
DLTASPAP