| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1766 |
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| Symbol | |
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| ID | 4038568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1917382 |
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| End bp | 1918764 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637977146 |
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| Product | glutamate decarboxylase |
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| Protein accession | YP_583914 |
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| Protein GI | 94310704 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.184514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA TGCAAGAGCA CAAGGTCACA CCGTACGACC AGTTCAACTA CGAGGTGCCT
GAAAACGTCT TCCCGCGCGA AGGCATCTCG GCGAATGCAG CGGCCGCGAT CGTGATCAGT
GACGAATGGA CCGACACCAA CCCCATGCTC AACATGTCGT CGTTCGTCAC CACGTTCGCG
GAACCGGAAG CCCGGGAAGT CGCCGCGCGC AATATCTTCA AGAACTATAT CGACCACGAC
ATGTATCCGC GGCTCTTCGC CATGGAAGGC CGCATGGTGC GCTGGCTGCA TGAACTGTGG
AACGGTCCGA AGGGCGTGGA GCCGTACGGC ACGTGTACGG TAGGCTCATC CGAAGCCTGC
ATGCTCGGGG GCCTGGCGCA CAAGTGGAAC TGGCGCCAGC GCCGCCAGGC CGAAGGCAAG
GATGCCACCC GCCCGAACAT GGTGACGGGC GGCAACGTGC AGATCGTGTG GAAGAAGTTT
CTGCGCTACT TCGACGTCGA GCCGCGCATC GTGCCGCTGA AGCCGGGCAA CTACTGCCTG
ACCGCCGAAG ACCTGGACAA GTACGTCGAT GAGAACACGA TCTGCGTCGT GGCCATCGCC
GGGCAGACCT TCACGGGCGA GGATGACGAC ATCCAGGGCA TTCACGACTG GCTCGATGCC
TACGAGAAGC GCACGGGCAT CTCGATCCCC ATGCATATCG ACGGCGCCTC CGGCGGCTTC
GTCAACCCGT TCCTCTACCC CGACTACAAG TGGGACTTCC GCCTGCCGCG CGTGCAGTCG
ATCAACGCCT CGGGCCACAA GTACGGGCTG ACGCCGCCGG GCCTCGGCTG GGTGGTGTTC
CGCGAACGCA AGATCTTCAA CGAGGAACTG GTGTTCTACG TGAACTACTT GGGCGGAGAA
ATGCCCACGG CCACGCTCAA CTTCAGCCGC AACGCATTCC AGGTGGCCGT GCAGTACTAC
CAGTTCCTGC GGCTCGGGTT CGACGGCTAC AAACGCGTGA TGCAGCACAC GCTGGACAAC
GCGATCTTCC TGCGCCAGCA GCTCGTCGAC AGCGGGTACT TCGACATCAT GAACACCACG
CAGCGCATTC CGGTGGTGGC AGTGACGCTG AACAAGAAGT ACAAGAACTT CAACGAGTTC
GATGTCTCCA ACAAGGTCCG CGAGAAAGGC TGGGTGCTGT CCGCGTACAC GATGCCGCCC
AACGCCGAAT CGGTCACGAG CCTGCGCGTG GTGGTGCGTC CGCATGTGAA CCACAACGTG
GCGCAACTGC TTGCCAACGA TATCATTAAC GCCTGCAAGT TCCTCGAGGC CAACGGTGGC
AATGCCAAGC CTCCCGCATT GCACAAACAT GCCGAAGCGC AATCGACGTC GTTGAAGTGC
TGA
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| Protein sequence | MSDMQEHKVT PYDQFNYEVP ENVFPREGIS ANAAAAIVIS DEWTDTNPML NMSSFVTTFA
EPEAREVAAR NIFKNYIDHD MYPRLFAMEG RMVRWLHELW NGPKGVEPYG TCTVGSSEAC
MLGGLAHKWN WRQRRQAEGK DATRPNMVTG GNVQIVWKKF LRYFDVEPRI VPLKPGNYCL
TAEDLDKYVD ENTICVVAIA GQTFTGEDDD IQGIHDWLDA YEKRTGISIP MHIDGASGGF
VNPFLYPDYK WDFRLPRVQS INASGHKYGL TPPGLGWVVF RERKIFNEEL VFYVNYLGGE
MPTATLNFSR NAFQVAVQYY QFLRLGFDGY KRVMQHTLDN AIFLRQQLVD SGYFDIMNTT
QRIPVVAVTL NKKYKNFNEF DVSNKVREKG WVLSAYTMPP NAESVTSLRV VVRPHVNHNV
AQLLANDIIN ACKFLEANGG NAKPPALHKH AEAQSTSLKC
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