| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1760 |
|---|
| Symbol | |
|---|
| ID | 4038562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1911300 |
|---|
| End bp | 1912208 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637977140 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_583908 |
|---|
| Protein GI | 94310698 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.176394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0428772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAGAC TCCTTGCAGC CGTCGTATTC ATGCTTGCCA TGGTCCAGCC GTTGCAAGCA
CAGGTGAAGC CATTTCCGCC AGGTTTCCGG CACCAGAATA TCCAGACCGA GGGCGCGACG
CTGTATGTGC GGGTGGGTGG CAGCGGGCCT GCCGTGGTCC TGCTGCACGG TTTTGGCGAT
ACAGGGGACA TGTGGGCGCC ACTGGCCGCC GAACTGGCAC GCACCCATAC GGTGGTGGTG
CCGGATCTGC GCGGAATGGG GCTGTCATCG CATCCTGACG GCGGCTACGA CAAGCGCACA
CAGGCTGGGG ACATCCGGTC GGTGCTGGCG CAACTGAACA TCGACCAAGC GGACGTGGTC
GGCCACGACA TCGGCACGAT GGTCGCCTAT GCCTATGCGG CGCGCTACCC GGACAAAACG
AAAAGGCTGA TCGTCATGGA CGCGCCAGTG CCAGGAGTCC CGCCGTGGGA ACAGATCGTC
CGAATGCCAG CGCTCTGGCA TTTCTCCTTC GGCGGCCCGG ATGCGGAGCG GCTGGTAAAA
GGCCGGGAAC GCATCTACCT GGACAGGTTC TGGAACGAGT TCGCCGGAGA CCCTTCGAAG
ATCGACGAAG CCACACGGGT TCACTATTCC CGGCTCTATG CCAAGCCGGG CGCGATGCAT
TCAGCGTTCG CGCAATTCCT CTCAATTCCG CAAGACGCCG AGGACAATCA GAAATCGCTG
GCGACCAAGC TGACCATGCC AGTACTGGCG ATTGGCGGCG CGAAGTCCTT TGGCCAGAAC
GAAGCGATCG TCATGCGCAA TGCGGCCACC AACGTGAAAG AACTAGTCAT TCCGAATGCC
GGGCATTGGC TGATGGAAGA ACAACCACAG GCCACAGTGG GCGCGATCGT CGATTTCCTC
GGACAATAG
|
|---|
| Protein sequence | MRRLLAAVVF MLAMVQPLQA QVKPFPPGFR HQNIQTEGAT LYVRVGGSGP AVVLLHGFGD
TGDMWAPLAA ELARTHTVVV PDLRGMGLSS HPDGGYDKRT QAGDIRSVLA QLNIDQADVV
GHDIGTMVAY AYAARYPDKT KRLIVMDAPV PGVPPWEQIV RMPALWHFSF GGPDAERLVK
GRERIYLDRF WNEFAGDPSK IDEATRVHYS RLYAKPGAMH SAFAQFLSIP QDAEDNQKSL
ATKLTMPVLA IGGAKSFGQN EAIVMRNAAT NVKELVIPNA GHWLMEEQPQ ATVGAIVDFL
GQ
|
|---|
| |