| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1749 |
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| Symbol | |
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| ID | 4038551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1896234 |
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| End bp | 1897430 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637977129 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_583897 |
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| Protein GI | 94310687 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.145441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAA TCGAACGAAA GAACAATAGT CGCGTGCCGT TGTCCCGCAG GCACATCAAG
ACAGCAATCG CGGTGGGGGT AGTGGCAGCT GCAGCGCTGA TTGTGGGAAT CGTCCCTCGA
GTGCATGGTG AGGCTGCCCT GCAAAAGCGC AGTATCGACG CACAGACTCC GGTTGTCGGT
ATTGTTTCCC CGAAGCCGGC GGCATCCTCG CAGGAGATCA CGCTGCCTGC CGATGTGCGC
GCCTATCAGG ATGCGGCCAT CCATGCGCGG GTGAATGGAT ACCTTCGAAA TTGGTATGTG
GATATCGGTA CTGAGGTAAA GGCTGGCCAG CTGCTGGCCG AAATCGACGC TCCGGAAGTC
GCGGACCAAC TTCGGCAAGC ACGCGCAGAC GAAGAGACTG CCTCTGCCAA CTACGCACTC
GCGAAGACTA CGGCCGACAG GTGGAAGGAT CTGCAGTCCA CCAACTCGGT AGCGCAGCAG
GAAACCGACC AGAAGGTCGC TGACATGCAG GCCAAAGCGG CATTGCTAGC TTCGGCTCGC
TCGAATACAG CGCGCGTCGC GCAACTGGCT TCGTACACGC AGATTCGGGC GCCGTTCGAT
GGTGTGATTA CCGCACGGAA CGTAGACGCC GGTGCGCTTA TTGATGCGGG GAGTGCGCCT
AACCAGGGGC GTGAACTGTT TCACATCTCG GCAGGCAACC GTCTTCGTGT CTATGTGCAG
GTCCCACAGT CAGTGAGTGC AGCGGTTGCG CCAGGCACCA AGGCTTGGTT GGCGCTACCG
CAATCGCCGG GCCACCACTT CCCGGCCACG ATTACGCGGA CGGCGGGCGC AATGGACCCG
GTGACCCGTA GTCTCCGAGT CGAGCTCGAT GTGGACAGTC AGGGTGGAAA GATCCTCCCA
GGTGCCTACG CCGAGGTCCA TATCGTGCCG GAAGCGGATA GGGCGGGATT GGATCTACCC
GCGAGTACGC TTATGTTTCC GGCCGGCGGG GCATCGGTGG CAATCATCGA CCAAAACGGG
AAGGTCGCGA TTCAGAAGAT CCAGTTGGGA CGTGACTTTG GTTCGCACGT AGAGGTCTTG
GGCGGACTGG CTGCGAGTGC CAAGGTTATC GTGAACCCGG GGGATGGGCT TGCCGGCGGC
GCGCGTGTGA GAGTGTCTTC GCCGCAGACG GTCGCGTCGC AAGGAGCTAA ATCGTGA
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| Protein sequence | MTQIERKNNS RVPLSRRHIK TAIAVGVVAA AALIVGIVPR VHGEAALQKR SIDAQTPVVG
IVSPKPAASS QEITLPADVR AYQDAAIHAR VNGYLRNWYV DIGTEVKAGQ LLAEIDAPEV
ADQLRQARAD EETASANYAL AKTTADRWKD LQSTNSVAQQ ETDQKVADMQ AKAALLASAR
SNTARVAQLA SYTQIRAPFD GVITARNVDA GALIDAGSAP NQGRELFHIS AGNRLRVYVQ
VPQSVSAAVA PGTKAWLALP QSPGHHFPAT ITRTAGAMDP VTRSLRVELD VDSQGGKILP
GAYAEVHIVP EADRAGLDLP ASTLMFPAGG ASVAIIDQNG KVAIQKIQLG RDFGSHVEVL
GGLAASAKVI VNPGDGLAGG ARVRVSSPQT VASQGAKS
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