Gene Rmet_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1742 
Symbol 
ID4038544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1889076 
End bp1889915 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content61% 
IMG OID637977122 
Producthypothetical protein 
Protein accessionYP_583890 
Protein GI94310680 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.429984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.334834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCGCT GGCTGGCTTA CTCAGGCAAT CCCATCCAAC TGGAAACGGT GCTGTTCCGG 
GCCCAGCACT CGTTGATCGA TCAAAGCCTG CATTCGCGGC TGGGCCACAC CACGACCAAC
GGCGACGGCT TCGGCATGGG GTGGTATGCC AAGCATTCCG AGGAACCGTT CCGGTACCGT
TGCATCCACC CGGCTTGGAA CGACATCAAC CTGCGCGAGG CGGCGCGCGC CATCCGAGCC
GCGAAGTTCG TCGCGCACAT TCGCGCGGCA ACGGACACCC CGGCCCAGGA AACCAACTGT
CATCCATTCC GATACGGCAG ATGGCTGTTT GCCCACAACG GGCTGATCCG CCAATACCCG
GAGGTCCGGC GCGAACTGAT GCTTTCGATC GCGCCCGAAC TGTTTCGCTG GATCGAAGGC
TCCACGGACT CGGAGGTCAT GTTCTATCTG GCACTGACTT TCGGGCTGGA GCGGGACCCA
CGCGAAGCAC TGCAAAGGAC GGTGGGACTG GTGGAACATG TGGGCCGCCG CCATGGGGTC
GATTTTCCCG TGAACATGAC CATTTGCGCG ACCGACGGCG ATCAGATCGT TGCGGTGCGG
TATTCCAGCG AAGGGGACTC GCGCTCGCTA TTCCACAGCA ATTCGTTTCG ACACCTCCGC
GAGTTATATC CGGAGAATCC AGGTATTGCC GCAGTGGGCG ATGATGCCGT GCTGATCCTG
TCCGAACCCC TGGTGGATCT GCCTGGCGCC TGGGCGGAGA TCCCGGAAGC CACGTTCATG
CAAGCCAGAC AGGGGACGGT CGACTACTAC CCGTTCATCC CGACGTATTC GGAGCCTTGA
 
Protein sequence
MCRWLAYSGN PIQLETVLFR AQHSLIDQSL HSRLGHTTTN GDGFGMGWYA KHSEEPFRYR 
CIHPAWNDIN LREAARAIRA AKFVAHIRAA TDTPAQETNC HPFRYGRWLF AHNGLIRQYP
EVRRELMLSI APELFRWIEG STDSEVMFYL ALTFGLERDP REALQRTVGL VEHVGRRHGV
DFPVNMTICA TDGDQIVAVR YSSEGDSRSL FHSNSFRHLR ELYPENPGIA AVGDDAVLIL
SEPLVDLPGA WAEIPEATFM QARQGTVDYY PFIPTYSEP