| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1741 |
|---|
| Symbol | |
|---|
| ID | 4038543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1888432 |
|---|
| End bp | 1888863 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637977121 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_583889 |
|---|
| Protein GI | 94310679 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.447862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.301328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGA TCGTACTGGC GATGGATGGG TCCACCTATA GCCGACATGC GGCAACATGG
CTTGCATCGA CGACATGCCT GGCCCAGCCC CTGATCGTGC ATGTGGTGCA CGTGTCGCCG
ATACTCGGAC GCACCGGCTT CAGCGCCGTC GATTTTGAAA CCGAGAATCG TGAAGAAGCA
CGTGTGGTGT TCGAATCGGC CAGAGGTCTG CTGGAAGGAC GAGTGAGCGA ATTGCACGAG
CACTGGCTGC GCGGCAATGC ATCGGAGGAG ATCCTTCGGT TCGCCACCGA GAACGCCGTG
GACCTGATCA TTGTGGGCGC CAAGGGGATC GGTGCGCTCC GGTCCTCGAT CATTGGCTCG
GTGGTATCGA AGATCGCAGC GCAGTCCACG GTGCCCGCGT TGATCGTCAA TCCGAACGAC
CAGGAAGGCT AG
|
|---|
| Protein sequence | MTAIVLAMDG STYSRHAATW LASTTCLAQP LIVHVVHVSP ILGRTGFSAV DFETENREEA
RVVFESARGL LEGRVSELHE HWLRGNASEE ILRFATENAV DLIIVGAKGI GALRSSIIGS
VVSKIAAQST VPALIVNPND QEG
|
|---|
| |