| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1727 |
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| Symbol | |
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| ID | 4038530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1872129 |
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| End bp | 1873346 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637977109 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_583877 |
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| Protein GI | 94310667 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.478605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAA TCCTGCAGGG CATCAAGGTA CTGGACCTGA CCCGTGTTGT GGCCGGGCCG
TGGGCTACTC AGAACCTGGC GGACATGGGT GCCACCGTCT ACAAGATCGA GAAACCCGGT
GATGGCGATG ACACGCGTCG GATGGGGCCA TTCCTGACCG ACGGCGATGG CAACGTGACG
AACGACTCCG CGTTCTTCCT CTGCTGCAAC CGTGGCAAGC AATCGGTCAC CGTCGATATT
TCGCAGCCGG AAGGCGCCGA ACTGGTACGC CAACTGGCAT CGCATTGCGA TGTCGTCGTG
GAGAACTACA AGGCGGGCAG CCTGAAGAAG TACGGACTCG ACTACGAGAG CATCCGTGCG
CTGCGTCCCG ACATCATCTA TTGCTCCGTG ACCGGCTTTG GTCCGGATGG CCCTTACGCG
CCCCGCCCCG CATACGACTT CATCCTGCAA GGCATGGCGG GGCTGATGAG CACCTGCGGG
CAGCCCGATG GCACGCCCGG CGCGGCGCCG ATGCGAACCG CGATTCCACT GACGGATATC
CTCACGGGGC TGTATGCATC GGTGGCACTG ATGGGCGCGC TCTATCACCG TCAGGCTACC
GGTGAGGGGC AATTCATCGA TGCCGCGATG ATCGATGCCG CAGTGGCCGC CAACGGCCAT
CTCGCGCTGG GCTATCACAT GACGGGAAAG GTGCCGCAGC GCGCCGGCAA CTCCAATCCG
GTGGCATCGC CTTCGGAGGT GTTCGCCTGC CTTGACGGCC ACGTCATCAT CGCCGCCGGC
AACAACGGTC AGTTCGCGGC GTTGTGCCGC GTGATCGGGT GTGCGTCGTT GATCGAAGAT
CCGCGATTCC TGCAGAACAT GGACCGCGTA CGAAATCGCC CGGTTCTGCG CGAGACATTG
GGTGAGCGTC TGCTGAACTG GCGTCTTGCC GACCTGATTC AGGCCCTGGA AGGCGCAGGC
GTGCCATGTG GCCCGATCAA CGACATCGAC GACGTTTTCG ACGATCCGCA AGTCCGGCAC
CGCGAACTGC TGGTACGCCT GCCGCACGGC AGTGGTGTCG AGGCGCCGAC GCTGCGCAGC
CCACTGCGCT TCTCTGCCAC GCCGGTCACG ATGACCGCGC CACCGCAACT TGGCCAGCAC
ACCGAAGCCG CGCTCCGGAG CGAATTGGGA ATGTCGGCAG CGGACGTGGA GGCCTTCCGG
GAGAGAGGCG TGATCTGA
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| Protein sequence | MSAILQGIKV LDLTRVVAGP WATQNLADMG ATVYKIEKPG DGDDTRRMGP FLTDGDGNVT
NDSAFFLCCN RGKQSVTVDI SQPEGAELVR QLASHCDVVV ENYKAGSLKK YGLDYESIRA
LRPDIIYCSV TGFGPDGPYA PRPAYDFILQ GMAGLMSTCG QPDGTPGAAP MRTAIPLTDI
LTGLYASVAL MGALYHRQAT GEGQFIDAAM IDAAVAANGH LALGYHMTGK VPQRAGNSNP
VASPSEVFAC LDGHVIIAAG NNGQFAALCR VIGCASLIED PRFLQNMDRV RNRPVLRETL
GERLLNWRLA DLIQALEGAG VPCGPINDID DVFDDPQVRH RELLVRLPHG SGVEAPTLRS
PLRFSATPVT MTAPPQLGQH TEAALRSELG MSAADVEAFR ERGVI
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