Gene Rmet_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1726 
Symbol 
ID4038529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1871006 
End bp1872019 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content64% 
IMG OID637977108 
Producthypothetical protein 
Protein accessionYP_583876 
Protein GI94310666 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.183123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGC AGAAGGACTC CCGCCGTGCC GCAAGGCGGC GGCTCGTGCA GGCGGCAATA 
CTCGCCAGTG GATTGATGCT GGCGGTGCCC GCCATGGCGC AGAGTGCCAG CACGCAGAAT
TGGCCGTCTC GGCCGGTACG TGTGGTGGTG CCATACCCGC CGGGTGGCGT GTCGGACGCG
GTAACCCGCC TCGTCATGCA GAAACTGGCC GAACGCATCG GACAACCGGT CGTAGTGGAG
AACCGCCCGG GTGCCAACGG CATGATCGGT TCAGACAACG TCGCCAAATC CGCGCCGGAC
GGCTATTCGC TGCTGGTTGT GGTGGCCGCG CACGCGATCA ACCCGAGCCT GTACCAGAAG
ATGAGCTACG ACCCGATCCG GGACCTGACT GGTGTGAGCG AGATTGGGCG TATTCCGCTA
CTGATGGTTT CGAGCGCGCA GTTGCCGCCG AAGTCGGTAA AGGAACTGGT GTCGTGGGGC
AAGGCGCATC CGGACCAGAT GACCTTCGCC TCGAGCGGCA GCGGGTCAGG CGCGCATCTG
GCCGGCGAGC TGTTTTCACA GGGCACGGGC ATGACGATGA CGCACGTGCC ATACAAGGGC
ATCTCGCCCG CGTTGCCAGA CCTTATCTCA GGTCAGGTGG CCGTGATCTT CGACTCTGTG
CAGACCATGA TTCCGCTGGC GAAGGCAGGC AAGGTTCGCG CGCTGGCCAT CACCAATCCG
CGCCGCTGGC CGGCTGCGCC CGATGTGCCC ACCATGGCTG AAGCCGGCTA TCCGAACATC
ATGCCATCGA GCTGGATCGG CGTGCTGGCG CCAGCAAAGA CGCCAACCGC CATCATTGAC
AAACTATCCG CGGAACTCGA CGCCGTGGTC CACGCGCCGG ACGTCCAGGC CAAGCTGATC
GACTACGGCA TTGACCCGGT TGGCGGCAAG GCGGATCAGT TCCAGGCATT CATCAAGGAA
GAAGCTGGGC GCTGGGCCAG CGTGGTGCAG AAGGCGGGGA TCAAACTCGA TTGA
 
Protein sequence
MTAQKDSRRA ARRRLVQAAI LASGLMLAVP AMAQSASTQN WPSRPVRVVV PYPPGGVSDA 
VTRLVMQKLA ERIGQPVVVE NRPGANGMIG SDNVAKSAPD GYSLLVVVAA HAINPSLYQK
MSYDPIRDLT GVSEIGRIPL LMVSSAQLPP KSVKELVSWG KAHPDQMTFA SSGSGSGAHL
AGELFSQGTG MTMTHVPYKG ISPALPDLIS GQVAVIFDSV QTMIPLAKAG KVRALAITNP
RRWPAAPDVP TMAEAGYPNI MPSSWIGVLA PAKTPTAIID KLSAELDAVV HAPDVQAKLI
DYGIDPVGGK ADQFQAFIKE EAGRWASVVQ KAGIKLD