| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1724 |
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| Symbol | |
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| ID | 4038527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1867095 |
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| End bp | 1869092 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637977106 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_583874 |
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| Protein GI | 94310664 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0387074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCTT CCTGCCGACC CTTCCATACC GTGCTCGTGG CCAACCGGGG CGAGATCGCC
ATCCGCATCA TGCGGACGGC CCGCCGACTT GGGCTTGGCA CCGTTGCCGT CTACTCCGAG
GCCGACCGCC ACAGCCCGCA CGTGGCCAGC GCGGATCGGG CCGTGTGCAT CGGTGCTGCC
GCGCCGCGTG AGTCCTACCT CAACATTGCA GCCATCATCG CTGCCGCGCG AAACGCTGGT
GCCGATGCCG TCCATCCGGG CTATGGCTTC CTGGCCGAGA ACGCCGAGTT CGCCGATGCT
GTGACCGACG CCGGGCTGGT CTTCGTCGGT CCGCCGGCCA GCGCCATCCG TGCCATGGGC
AACAAGGCCG AGGCCAAGCG CCTGATGCTG GCCGCGGACA TGCCGTGCGT GCCCGGCTAT
CAGGGCGAGG CGCAGGACGA CAAGACCTTG CTGGCAGAAG CCGGGCGCAT CGGCTTTCCG
CTCATGGTCA AAGCTGCAGC AGGCGGCGGC GGACGCGGCA TGCGATTGGT GCCCGATGCC
GCTGCATTGC CCGCGGCGCT CGCCAGTGCG CGGTCGGAAG CCGCGACGGC GTTCGGCAAC
GACGAACTGA TCCTGGAACG CGCGGTCATC CAACCACGCC ACGTCGAGAT TCAGGTCTTT
GCCGACGCGC ATGGCAATGT GATCCACCTT GGAGAGCGCG ATTGCTCGGT GCAGCGCCGC
CACCAGAAGG TGATCGAGGA AGCCCCATCG CCGGCGGTAT CGCCCGCGCT GCGCGGCAGG
ATGGGCGAGG CAGCCGTGCG GGCGGCACGG GCCATTGGCT ACGTGGGAGC CGGCACGATG
GAGTTTCTGC TCGATGCCGA CGCCAACTTC TACTTTATGG AGATGAACAC CCGGTTGCAG
GTGGAACACG CCGTGACCGA GGCTATCACC GGGTTCGACC TCGTGGCATG GCAACTGCAA
GTTGCCGCGG GCGAAACGCT GCCAGCGACG CAGGATCAGG TGACGTTCGA CGGCCACGCG
ATCGAAGTGC GCCTGACGGC CGAGGACGTG CCTGCAGGAT TTCTTCCCCA GGGCGGTCCG
GTGCTGCGCT GGCGCGCCCC GGAGTCGGGC CACGACGTGC GTGTCGACCA TGCGCTGGAA
ACCGGGGGCA CTATCCCCAC GCACTATGAC TCGATGATCG CCAAGCTCGT GGCCCATGGG
CGCACACGCG AGGAAGCGCG TCAGAAGCTG TTGCGAGCGG TGCAGGACTG CGTGCTGCTC
GGCGTGCCAT CGAACCAGCC GTTCCTGGCG TCGTGCCTTG CCAGTGCGGC GTTCGCTGGC
AATGACGTGC ACACGGGCTT CGTCGACGCG CATATGCAGG CGTCGTTGCA ACCCACCGAA
CCATCCAGTC ATGTGGTTGC CATTGCCGCA CTGACGGCAT CTGGTCAGTT GTCGCGGAGC
GAGCCCGTCG CGCTATTGCG AATGACAACG TCGGTGAGAC TGCACGCGGA AGGAAGACCG
TGGGACTCGG CAGTGCAGGC GACAGAAGAA GGCTGGCGCG TTACCGTCAG CGCGCGCGGA
GAGACGGGCG CGCAGCCAGT CCACGTGCGG ATGCTCCGCG ACCATGCGGC TGACGGGGCG
GCATGGATCG AGTGCGACGG TATGGCTCGG CCTGTTCTCC ATGCTGACGA CGATCTGGCA
ATACATCTGT TTGCCGACGG TCGGGCCTGG CGCTTCACCC GACACGACCC GCGCCGTCGA
AATACGGAAG GGGAGTCATC AGGCGCGCTC ACCGCGCCGC TGACGGCCCG GATCGTGGCC
GTCAACGTGG CGGAAGGTGA TCGTGTGGAG GCGGGCCAGT CGCTGGTTGT GCTGGAAGCG
ATGAAAATGG AACACACGCT CGTCGCCCCG TTCGCCGGCG TCGTCTCGGA ATTGTCGGCA
CGCGCTGGCG GACAGGCCAG CGCCGGCACC CTGCTGGTGC GCGTGGTTGC TGAGGAAGCA
GGGGAGGGCA AGGCATGA
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| Protein sequence | MSASCRPFHT VLVANRGEIA IRIMRTARRL GLGTVAVYSE ADRHSPHVAS ADRAVCIGAA
APRESYLNIA AIIAAARNAG ADAVHPGYGF LAENAEFADA VTDAGLVFVG PPASAIRAMG
NKAEAKRLML AADMPCVPGY QGEAQDDKTL LAEAGRIGFP LMVKAAAGGG GRGMRLVPDA
AALPAALASA RSEAATAFGN DELILERAVI QPRHVEIQVF ADAHGNVIHL GERDCSVQRR
HQKVIEEAPS PAVSPALRGR MGEAAVRAAR AIGYVGAGTM EFLLDADANF YFMEMNTRLQ
VEHAVTEAIT GFDLVAWQLQ VAAGETLPAT QDQVTFDGHA IEVRLTAEDV PAGFLPQGGP
VLRWRAPESG HDVRVDHALE TGGTIPTHYD SMIAKLVAHG RTREEARQKL LRAVQDCVLL
GVPSNQPFLA SCLASAAFAG NDVHTGFVDA HMQASLQPTE PSSHVVAIAA LTASGQLSRS
EPVALLRMTT SVRLHAEGRP WDSAVQATEE GWRVTVSARG ETGAQPVHVR MLRDHAADGA
AWIECDGMAR PVLHADDDLA IHLFADGRAW RFTRHDPRRR NTEGESSGAL TAPLTARIVA
VNVAEGDRVE AGQSLVVLEA MKMEHTLVAP FAGVVSELSA RAGGQASAGT LLVRVVAEEA
GEGKA
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