| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1685 |
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| Symbol | |
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| ID | 4038488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1824523 |
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| End bp | 1825590 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637977067 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_583835 |
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| Protein GI | 94310625 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00216281 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTC CTACCAACAA GCTCGTTCCC GCCCTGGTCG TGCTCGCTGC CGTCGCCGGC
GGCTGGTACG CATGGGATCG CCTGCGCGAC AACGGCCCCG GCGAAGGTTT CGCGCGCGGC
AACGGTCGCA TCGAGGCCAC CGAGGTCGAT GTGGCGACCA AGCTCGCTGG CCGGGTCAGC
GACATCCTCG TCTTTGAAGG CGATTTCGTG ACGGCCGGCC AGCCACTGGC CCGGATGCAG
ATCACCACGC TCGAGGCCCA GCACGATGAA GCCGTGGCCC AGCATCAGCA AGCCATCAAC
GCAGCCGCGG CGGCTGTGGC GCAGGCCGCG GCGCGCAAGA GCGACAAGGC CACGTCGGAA
GCGTTGGTCG GCCAGCGCGA GGCCGAACTC GACGCAGCGC TCCGTCGGCG CGCCCGCTCC
GAAACCTTGT CCAAGGAAGG CGCCTCCTCG ATCCAGGAAC TGGACGACGA CCGCGCGCGT
GAGCGCAGCG CCCAGGCAGC CGTGACCGCA GCCCGCGCCC AGGTGGCCGC AGCCCAGTCG
GCCATCGAGG CCGCCCAGGC ACAGGTAGTT GGCGCGCAGT CGACGGTCGC CGCCACGCAG
GCCACTATCG CCCGCATCCG GGCCGATATC GACGACAGCG AGCTGAAGGC ACCGCGCGAC
GGCCGGATCC AGTACCGCGT GGCGCAGCCA GGCGAAGTGC TCGGCGCTGG CGGCAAGGTA
CTGAACCTCG TGGATCTGTC GGATGTGTAC ATGACCTTCT TCCTGCCCGA AGCACAGGCC
GGTCGGCTTG CCATCGGCCA AGACGCCCGG ATCATTCTGG ACGCCGCTCC GGAGTATGTG
ATTCCGGCAA AGATCTCCTT TGTCTCGAGC ACCGCGCAGT TCACGCCAAA GACCGTGGAA
ACGGAAAGCG AGCGCCAGAA ACTGATGTTC CGGGTTCGCG CCAAGATCGA TCCGGATCTG
CTGCGCAAGC ATCTGAAAGT GGTCAAGACG GGGCTTCCTG GGGTGGCATG GGTCAAGCTC
GATGCCAAGG CAGAGTGGCC GGCGTCGCTG ACCACAAAAT TACCTTGA
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| Protein sequence | MKLPTNKLVP ALVVLAAVAG GWYAWDRLRD NGPGEGFARG NGRIEATEVD VATKLAGRVS
DILVFEGDFV TAGQPLARMQ ITTLEAQHDE AVAQHQQAIN AAAAAVAQAA ARKSDKATSE
ALVGQREAEL DAALRRRARS ETLSKEGASS IQELDDDRAR ERSAQAAVTA ARAQVAAAQS
AIEAAQAQVV GAQSTVAATQ ATIARIRADI DDSELKAPRD GRIQYRVAQP GEVLGAGGKV
LNLVDLSDVY MTFFLPEAQA GRLAIGQDAR IILDAAPEYV IPAKISFVSS TAQFTPKTVE
TESERQKLMF RVRAKIDPDL LRKHLKVVKT GLPGVAWVKL DAKAEWPASL TTKLP
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