Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1640 |
Symbol | |
ID | 4038443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1772607 |
End bp | 1773845 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637977024 |
Product | putative UreA/short-chain amide ABC transporter |
Protein accession | YP_583792 |
Protein GI | 94310582 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000640664 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA AAGCACAAAA GCTCGCTGCC GCGGTACTGG TCACGGCGGC ATTCACCAGC GTGGCCGCGC ACGTCCACGC GCAACCCAAG CCCGGTATCT CCGACGATAT CGTCAAGATC GGACTACTGC TCGACATGAG CGGCCTGTAC TCCGACGTCA CCGGGCGCGG TAGTGCCGCC GCCGCGCAGA TGGCGATCGA CGACTTCGGC GGCAAGGTAC TTGGCAAGAA GATAGAACTG GTGGTGGTCG ATCACCAGAA CAAGGCCGAT ATCGCCGCCA ACAAGGCGCG CGAATGGTTC GATCAGGACC ACGTGGACGC GATCCTCGAC GTGGCCGCAT CGGCGCCCGC GCTGGCCGTG CTGGACGTCG CCAAGCAAAA GAACAAGATC GTGGTGTTCT CGGGCCCCGG CACGGAGCGC ATCACAAATG ATCTGTGCAC GCCCGTGTCC GTCCACTACG CATATGACAC CTACGCGCTG GCCAACACCA CCGCGCGCGC CATGGTCGAG CGTGGCGGCA AAACGTGGTT TTTCCTGACG GCCGACTACG CCTTCGGCCA TACACTGCAG CAATCGGCCA CCGCCGTGGT CAATGAGGCC GGCGGCCGCG TGCTGGGCGC CGCACGGCAT CCTCTCAACA CGAGCGACTT CGCCTCTTAT CTGCTGCAGG CCCAGGCCAG CAAGGCACAG GTGGTAGGAC TGGCCAATGC CGGTGGTGAC ACTGTCAACG CGATCAAGGC CGCATCCGAG TTCGGCCTGA CACGCAATGG CAATCAGAAG CTGGCCGGGC TGCTGCTTTA CATCAACGAC ATCCATGCCA TCGGCCTGAA GACCGCCCAG GGTCTGGTGC TGACCGAGGC GTTTTACTGG GACATGAATG ACGCCACGCG CGCGTGGTCA CGCCGTTATT TCGAGAAGGT CAAGAAGATG CCGAACATGA GCCAGGCCGG TGTCTACTCA TCGGTCTCGC ACTACCTGAA GGCTGTGCAG GCAACCGGTA CCGACGAGAC CGCGGCGGTC ATGAAGCAGA TGAAAGCCAC GCCGATCAAC GACTTCTTCG CAAAGAACGG ACGCATCCGC GAGGACGGCC GCATGGTGCA CGACATGTAC CTGTTCGAAG TGAAGAAGCC CGAGGAATCG AAGTATCCGT GGGACTACTA CAAGCTACTG GCCACGGTGC CTGGAGACCA GGCGTTCATT CCGCCTTCGA AGTCGCAATG CCCGTTGCTG AAGAAGTAA
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Protein sequence | MKTKAQKLAA AVLVTAAFTS VAAHVHAQPK PGISDDIVKI GLLLDMSGLY SDVTGRGSAA AAQMAIDDFG GKVLGKKIEL VVVDHQNKAD IAANKAREWF DQDHVDAILD VAASAPALAV LDVAKQKNKI VVFSGPGTER ITNDLCTPVS VHYAYDTYAL ANTTARAMVE RGGKTWFFLT ADYAFGHTLQ QSATAVVNEA GGRVLGAARH PLNTSDFASY LLQAQASKAQ VVGLANAGGD TVNAIKAASE FGLTRNGNQK LAGLLLYIND IHAIGLKTAQ GLVLTEAFYW DMNDATRAWS RRYFEKVKKM PNMSQAGVYS SVSHYLKAVQ ATGTDETAAV MKQMKATPIN DFFAKNGRIR EDGRMVHDMY LFEVKKPEES KYPWDYYKLL ATVPGDQAFI PPSKSQCPLL KK
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