| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1624 |
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| Symbol | |
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| ID | 4038427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1752245 |
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| End bp | 1753843 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637977008 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_583776 |
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| Protein GI | 94310566 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.594249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATAA TAAGCACGCT TATTAATCTG CGCCAGCCCT TCCAGCCCCC CCCAATGTCC
TCCGTGGTTT CCGGCGCGGC ACAGCCAGCC GCCACCCCGC TCAACCGGCC GATGATCACC
CTTTCGATCA TGCTGGCCAC GCTGATCCAG ACGCTCGACA GCACCATCGC CAACGTGGCC
CTGCCGCACA TGCAGGGTAC GCTTTCGGCC TCGCAGGACG AAATCACATG GGTGCTGACT
TCCTACATCG TCGCCGCAGC CATCGCCACG CCGCTGACCG GCTGGCTGTC CGACCAGCTC
GGCGTCAAGC GGCTGCTGGC TATCTCGATC GGCGGATTTA CCGTGGCTTC GGCGCTGTGC
GGGATGGCGG ACTCCCTCAC CCAGATCGTG GCCGCGCGGC TGCTGCAAGG GGTTTTTGGG
GCGGCGCTGG TGCCGCTGTC CCAGTCGATC CTGCTCGATA TCAATCCACC GTCGCGCCAG
GGGCAGGCCA TGGCCGTGTG GGGCATGGGC GTGATGGTCG GGCCAATTCT CGGGCCCACA
CTGGGCGGCT GGCTGACCGA CAGCTACAAC TGGCGCTGGG TGTTCTTCAT CAACGTGCCG
ATCGGCCTGT TCGCGTTGTT CGGCGTGCTG GCCTCGCTAC CGAACCGCAC CCCGGCGCGC
AGCATGAGAT TCGACGCGTT CGGCTTCGCC ACGCTGAGTC TCGCTATCGG GGCGTTGCAG
GCCATGCTGG ACCGCGGCGA ACAACTTGAC TGGTTCGGCT CGCTCGAAAT CCGCGTCGAG
GCGCTGATCT GCGTGATCGC CTTCGCCTAC TTCCTGATCC ATACGGCCAC AGCCGGCGAA
AAGTCGTTCT TCCGTTCCGC GCTGCTCAAG GACCGTAATT TCGTCACCGG GGCCTGTTTC
ATCTTCGTGA TCGGCGCGGT CATGTATGCC ACCCGCGCGC TGCTGCCGCC GATGCTGCAG
AACCTGATGG GCTATCCGGT GGCCACCACG GGGCTGGTTA CCGCGCCAAG CGGGCTGGGC
ACGATGATCG CGATGATGCT GGCGGGCCGG CTGCTGCGGC GCGTGGATGC GCGGCTGCTC
CTGTTGGCCG GCTTCCTGAT CTCCGCCTTC GCACTGTGGC AGATGATGGG CTACACCGTG
GTGCTTTCGA TGTCGGATAT CGTCGTACCG GGCATCATCC AGGGCTTCGG CCTGGGGCTC
GTGTTCGTAC CGCTGTCGGC GCTGACGTTC TCCACACTGG AGCCGTCCCT GCGCGCCGAT
GGCACGGCCA CATACAGCCT GATGCGCAAT ATCGGCAGCA GCATCGGCAT CTCGCTGATC
CAGACCATGA TGACCCGCAA CGCGCAGGTG GCGCACAGCG ACCTGGTCAC GCATATCAAC
CCGTACAACC CGGCGCTGCA GTCGATGCTC ACGCATGGCT CGCGGATCGA CATCGCGGTG
CTGAACCAGA CCATCAACCA GCAGGCAGCG ATGATCGCCT ATCTGAACGA CTTCAAGGCG
ATGTTCATCG CCACGCTGGT GGTGGTGCCG CTGATCCTGT TGATCCGCCC CGGCGCGAAG
CACGCCGACG ACAGCCTGGC GCACGCGGCG ATGGATTGA
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| Protein sequence | MIIISTLINL RQPFQPPPMS SVVSGAAQPA ATPLNRPMIT LSIMLATLIQ TLDSTIANVA
LPHMQGTLSA SQDEITWVLT SYIVAAAIAT PLTGWLSDQL GVKRLLAISI GGFTVASALC
GMADSLTQIV AARLLQGVFG AALVPLSQSI LLDINPPSRQ GQAMAVWGMG VMVGPILGPT
LGGWLTDSYN WRWVFFINVP IGLFALFGVL ASLPNRTPAR SMRFDAFGFA TLSLAIGALQ
AMLDRGEQLD WFGSLEIRVE ALICVIAFAY FLIHTATAGE KSFFRSALLK DRNFVTGACF
IFVIGAVMYA TRALLPPMLQ NLMGYPVATT GLVTAPSGLG TMIAMMLAGR LLRRVDARLL
LLAGFLISAF ALWQMMGYTV VLSMSDIVVP GIIQGFGLGL VFVPLSALTF STLEPSLRAD
GTATYSLMRN IGSSIGISLI QTMMTRNAQV AHSDLVTHIN PYNPALQSML THGSRIDIAV
LNQTINQQAA MIAYLNDFKA MFIATLVVVP LILLIRPGAK HADDSLAHAA MD
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