| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1618 |
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| Symbol | |
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| ID | 4038421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1745040 |
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| End bp | 1746302 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637977002 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_583770 |
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| Protein GI | 94310560 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.346531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACG CCGAACTGGT CCGTCGCAAG GATGCCGCTA CCCCGCGTGG GGTAGGTGTG
ATGTGCAATT TCTACGCCGA CCGCGCCGAG AACAGCGAAA TCTGGGATGT CGAGGGCAAG
CGGTACATCG ACTTCGCTGC CGGCATCGCC GTGCTCAACA CGGGCCATCG TCACCCGCGC
CTGGTGGCCG CGCTGCAGGC GCAACTGAAT CGCTTCACCC ATACGGCGTA CCAGATCGTG
CCGTACGCCA GCTATGTGGA GCTGGCCGAG AAGATCAACC AGCGCGCGCC GGGCCGCTCA
GCTCGCAAGA CGGCCTTCTT CACGACCGGC GCGGAAGCGG TGGAGAACGC CGTCAAGATC
GCGCGCGCCG CCACCGGCCG GCCCGGCGTG ATCGCGTTCT CAGGCGGGTT CCATGGCCGC
ACGATGATGG GCATGGCGCT GACTGGCAAG GTGGCCCCGT ACAAGACCGG CTTCGGGCCG
TTCCCCGGCG AGGTCTTCCA CGCGCCTTAC CCGTCTGCAT TGCATGGCGT GACGGTGGAG
GATTCGCGCC GCGCGCTCGA ACACCTGTTC AAGGCCGATA TCGACCCGCG CCGCGTGGCA
GCCATCATCT TCGAACCGGT GCAGGGCGAA GGCGGCTTCA ACGTGGCGCC GCCGGAGTTC
GTGCGGATGC TGCGCGCTGT GTGCGACGAG CACGGCATCC TGCTGGTGGC CGATGAGGTC
CAGACCGGTT TCGGCCGCAC GGGCAAGCTG TTCGCGATGG AGCACTACGA CGTCGCGCCG
GACCTGACCA CGATGGCCAA GAGCCTGGCC GGCGGGATGC CGCTTTCCGC CGTGTGTGGC
CGTGCCGAAA TCATGGATGC GCCCGCGCCG GGCGGCCTCG GCGGGACCTA CGCCGGCAAT
CCGCTGGCGG TGGCGTCCGC GCTGGCCGTG CTCGACGTGC TCGAGTCCGA GAACCTGATC
GCGCGAGGCG CGGAGCTTGG CGAACGACTG ACGGCCCGCC TGAACAGCCT CAAGCCGCGC
GTGCCGCAAA TCGCCGAAGT CCGTGGCATC GGCGCAATGG TGGCCGTGGA GTTCCGTCGC
GCCGATGGCA GCCCGGATGC GGAGTTCACC CGCGAAGTGC AGAACCGCGC GCTGGAGAGG
GGCCTGTTGC TGCTGTCGTG CGGCGTGTAC GGCAACGTGA TTCGCTTCCT GTTCCCGCTG
ACCATCCAGG ACGCCGTGAT GAACGAGGGC CTCGACATCC TGGCAGACGT GCTGACTCGC
TGA
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| Protein sequence | MKNAELVRRK DAATPRGVGV MCNFYADRAE NSEIWDVEGK RYIDFAAGIA VLNTGHRHPR
LVAALQAQLN RFTHTAYQIV PYASYVELAE KINQRAPGRS ARKTAFFTTG AEAVENAVKI
ARAATGRPGV IAFSGGFHGR TMMGMALTGK VAPYKTGFGP FPGEVFHAPY PSALHGVTVE
DSRRALEHLF KADIDPRRVA AIIFEPVQGE GGFNVAPPEF VRMLRAVCDE HGILLVADEV
QTGFGRTGKL FAMEHYDVAP DLTTMAKSLA GGMPLSAVCG RAEIMDAPAP GGLGGTYAGN
PLAVASALAV LDVLESENLI ARGAELGERL TARLNSLKPR VPQIAEVRGI GAMVAVEFRR
ADGSPDAEFT REVQNRALER GLLLLSCGVY GNVIRFLFPL TIQDAVMNEG LDILADVLTR
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