Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1572 |
Symbol | |
ID | 4038375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1692332 |
End bp | 1692808 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637976956 |
Product | putative 6-pyruvoyl tetrahydropterin synthase |
Protein accession | YP_583724 |
Protein GI | 94310514 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein [TIGR03367] queuosine biosynthesis protein QueD |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.794785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC AAGTTTCGAT TACGCGCCGG CTCGAATTCG ACGCCGGGCA CCGCATCCCA AGCCATGGCG GACAGTGCCG CAACATCCAT GGCCACCGCT ATCGTCTGGA CCTGACGCTG TCCGGCGAAG TCCTGCACCA GGAGGGCGCG CCCGATGACG GCATGATCCT GGATTTCGGC GATATCAAGA CGCTGGCCAA CGAGCATCTG GTGTCGAAGT GGGATCACGC GTTCCTGATC TATCGTGGCG ATACCGCGCT GCTGAATTTC CTGCAGTCGA TGGACAACCA CAAGACCGTG GTGATCGACA GCATTCCGAC CGTTGAAAAC CTTGCGCAGG TGGCGTTCGA CATCCTGGCG CCGGTCTTCA AGGACTGCTT CGATCATCAT CTGCAACTGA CCCGCCTGGT GCTGTTCGAG ACGCCGAACT GCTGGGCCGA GGTCAGCGCG CCGCTCAGCC TGCCCGCGCA GGACTGA
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Protein sequence | MSKQVSITRR LEFDAGHRIP SHGGQCRNIH GHRYRLDLTL SGEVLHQEGA PDDGMILDFG DIKTLANEHL VSKWDHAFLI YRGDTALLNF LQSMDNHKTV VIDSIPTVEN LAQVAFDILA PVFKDCFDHH LQLTRLVLFE TPNCWAEVSA PLSLPAQD
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