Gene Rmet_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1572 
Symbol 
ID4038375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1692332 
End bp1692808 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content61% 
IMG OID637976956 
Productputative 6-pyruvoyl tetrahydropterin synthase 
Protein accessionYP_583724 
Protein GI94310514 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.794785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC AAGTTTCGAT TACGCGCCGG CTCGAATTCG ACGCCGGGCA CCGCATCCCA 
AGCCATGGCG GACAGTGCCG CAACATCCAT GGCCACCGCT ATCGTCTGGA CCTGACGCTG
TCCGGCGAAG TCCTGCACCA GGAGGGCGCG CCCGATGACG GCATGATCCT GGATTTCGGC
GATATCAAGA CGCTGGCCAA CGAGCATCTG GTGTCGAAGT GGGATCACGC GTTCCTGATC
TATCGTGGCG ATACCGCGCT GCTGAATTTC CTGCAGTCGA TGGACAACCA CAAGACCGTG
GTGATCGACA GCATTCCGAC CGTTGAAAAC CTTGCGCAGG TGGCGTTCGA CATCCTGGCG
CCGGTCTTCA AGGACTGCTT CGATCATCAT CTGCAACTGA CCCGCCTGGT GCTGTTCGAG
ACGCCGAACT GCTGGGCCGA GGTCAGCGCG CCGCTCAGCC TGCCCGCGCA GGACTGA
 
Protein sequence
MSKQVSITRR LEFDAGHRIP SHGGQCRNIH GHRYRLDLTL SGEVLHQEGA PDDGMILDFG 
DIKTLANEHL VSKWDHAFLI YRGDTALLNF LQSMDNHKTV VIDSIPTVEN LAQVAFDILA
PVFKDCFDHH LQLTRLVLFE TPNCWAEVSA PLSLPAQD