| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1568 |
|---|
| Symbol | |
|---|
| ID | 4038371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1689494 |
|---|
| End bp | 1689913 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637976952 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_583720 |
|---|
| Protein GI | 94310510 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2202] FOG: PAS/PAC domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.683844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.817787 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATTT CAACGAACAC GGCAGCGCAA ATCCTCGAAC AACTCGCCGA CGCACTCATC
TTTGCCGATA CGGACGGCCG AATCACGGGC TGGAATCATG CTGCGGCGGA ACTCTTCGGA
TACGGCCCGG ACGAGGCGCT GGGCCAAAGT CTCGACCTGA TCATTCCCGA GCGCCTGCAG
GCCGCGCACT GGAAGGGATT TCAGGCCGCT ATCGACACCG GCAAGACCCG GCTCTCCGGC
AAGCCGACAC TGACCAAGGC GATCCACAAG GACGGACGCA AACTCTTTGT GGAAATGACG
TTTGCGCTGA TCAGCGATGC GAACGGCAAT GTCATCGGCT CAGTCGCCGT TGCACGGGAT
GTCACGGACA AGGTCGAGCG GGAACGCGCC CAGAGCGCTG CGGGGCCAGT GTCAAGATAG
|
|---|
| Protein sequence | MTISTNTAAQ ILEQLADALI FADTDGRITG WNHAAAELFG YGPDEALGQS LDLIIPERLQ
AAHWKGFQAA IDTGKTRLSG KPTLTKAIHK DGRKLFVEMT FALISDANGN VIGSVAVARD
VTDKVERERA QSAAGPVSR
|
|---|
| |