| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1562 |
|---|
| Symbol | |
|---|
| ID | 4038365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1683274 |
|---|
| End bp | 1684194 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637976946 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_583714 |
|---|
| Protein GI | 94310504 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2253] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.252328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGA CCTATCTCGA TACCGCGCGC CTGCTGACGC AGGTGGCGCC ACTGGTGTTC
GTGGATGACA CCTTCGCCTT GAAGGGCGGC ACGGCGATCA ATCTGTTCGT GCGCGACATG
CCGCGTCTGT CGGTTGATCT CGATCTGGTC TTTCCCGATC ACACGCTGCC GCGTGACGAG
GCGCTGGCGC GCATCAACGA GGCTGTTCGG CAGGCTGCCG AGCGGTTGAA GAAACGAGGC
TTCCAGACGC ACGCACCAGC GGCAGCAGCA GGAGAGACGA AGTTGCTGGT GCGTCGTGGC
TCGATTCAGG TCAAGGTCGA AGTCAACTTC GTCATGCGTG GCACGGTGCA GCCGGTGCGC
CGTGCTTCGC TGACGCCGGT TGCCCGCGAC GTGTTGATGG CCGATCTAGA GATTCCGGTG
GTGTCGCTGG AAGACGTGTA CGGCGGCAAG CTGGTGGCGG CACTGGATCG GCAGCACCCA
CGCGATCTGT TCGACGTGAT GCAGCTCTTT GCGCACGAGG GCATCACGCC TGGCATCCGG
CGCGCCTTCG TGGTTTACCT CGCCAGCAGC AACCGGCCGA TCCATGAAGT GTTGTTCACG
CCGCTGCGGG ACATCCGGCA TGACTACGAG CACAACTTCC AAGGCATGAC AGTCGAGCCC
GTGCCGCTCG ATGCGCTACT CGCCACGCGA GAACGCATGG TGCGCGAAGT GCAGCAGGGC
TTGGACGACG ACGAGCGGCG CTTCCTGCTG TCGCTGGTCG TCGGCACGCC GGAGTGGTCA
TTGCTGGGCA TCGCACACCT CGAACATCTG CCGGGCATCC GCTGGAAGCT GCGCAACCTG
GCGCAGTTGC AGAAGGTCGA TGCGAGGAAG TTTGGCGAGC AGGCTGACCT GCTCGCCAAG
CAGCTATCTG CGCTATGCTA G
|
|---|
| Protein sequence | MNQTYLDTAR LLTQVAPLVF VDDTFALKGG TAINLFVRDM PRLSVDLDLV FPDHTLPRDE
ALARINEAVR QAAERLKKRG FQTHAPAAAA GETKLLVRRG SIQVKVEVNF VMRGTVQPVR
RASLTPVARD VLMADLEIPV VSLEDVYGGK LVAALDRQHP RDLFDVMQLF AHEGITPGIR
RAFVVYLASS NRPIHEVLFT PLRDIRHDYE HNFQGMTVEP VPLDALLATR ERMVREVQQG
LDDDERRFLL SLVVGTPEWS LLGIAHLEHL PGIRWKLRNL AQLQKVDARK FGEQADLLAK
QLSALC
|
|---|
| |