| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1558 |
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| Symbol | |
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| ID | 4038361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1679916 |
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| End bp | 1680917 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637976942 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_583710 |
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| Protein GI | 94310500 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00584064 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGT CTTTCCGCTT TTACGCTTTG CCGTTGATGC TTGCTGCCCT TGCGGGTTGC
GCCACGCAGG GCAAGCCGCC GCCCGTGATC TCGCTCGATG AGTCAGTGCA GGCCCAGCCG
CTGCCTGAGC CGCCGACGCC GATAGAGGTG GTGGCCGTGC CCGAGGTGCT ACCGATGCCG
GCGCAATTGA AGCCGCTGCC CGAAGCCGAG GACGCCAAGC CCGCGCCGGA GCCGGCCGAC
GAGAAGGTGC GCGTCTCGCG CGCCAATGCC GAGGCCCGCG TCGCGCCCAC GCGCGAGGGC
TACGTCAACG CGATTCAGGT GTGGCCCTTC ACGGATGGCG CGCTCTATCA GGTCTATGCG
GCCGTGGGCC GCGTGACCGT GGTTTCGCTC CAGCCGGGCG AGGAACTGGT GACGGTGGCC
GCCGGCGATA CCGTGCGCTG GATCGTGGGC GACACGTCCA GCGGCAGCGG TGCCGACCTG
CGCGTGAACG TGCTGGTCAA GCCGATCCGC TCGGGCCTCA AGACCAATCT CGTCATCACC
ACCAGCCGTA GGACGTACCT GCTGGAGCTG GCTTCGACCG AGAAAACGTG GATGGCGTCG
GTGTCCTGGG AATACCCACG CGACCGGATG CTGGCCTTGC AGCGCCAGGC GCAGGCGGCC
AGCGCCGCCG CGCCCGTGGA CTCTGGCTTG TCGCTGGAGA ACCTGCGCTT CCGCTACGCG
ATCAGCGGCA GCAATCCGCC GTGGAAGCCA CTGCGTGCCT TCGACGATGG CGCGAAGGTC
TATATCCAGT TTCCAGCGGG CATCGCCCAG GGCGAGCTGC CGCCGCTGTT CGTCATTGGC
GCCCAGGGCG ACGGGCAGTT GGTGAACTAC CGCTTCCGCT CGCCGTATTT CATCGTCGAT
CGCCTGTTCG GCGCCGCCGA GTTGCGCTTG GGCGGGGACA AGGGCGACGT GGTGCGGATC
GAGCGCACGG ATGGCGTCGT GGGCTCGGTC GGGAGGAACT GA
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| Protein sequence | MSLSFRFYAL PLMLAALAGC ATQGKPPPVI SLDESVQAQP LPEPPTPIEV VAVPEVLPMP
AQLKPLPEAE DAKPAPEPAD EKVRVSRANA EARVAPTREG YVNAIQVWPF TDGALYQVYA
AVGRVTVVSL QPGEELVTVA AGDTVRWIVG DTSSGSGADL RVNVLVKPIR SGLKTNLVIT
TSRRTYLLEL ASTEKTWMAS VSWEYPRDRM LALQRQAQAA SAAAPVDSGL SLENLRFRYA
ISGSNPPWKP LRAFDDGAKV YIQFPAGIAQ GELPPLFVIG AQGDGQLVNY RFRSPYFIVD
RLFGAAELRL GGDKGDVVRI ERTDGVVGSV GRN
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