| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1557 |
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| Symbol | |
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| ID | 4038360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1679215 |
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| End bp | 1679919 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976941 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_583709 |
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| Protein GI | 94310499 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000776204 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTCA AGAAACCACA GGTGCGCTAT GCCGACACGC CGCAGGCTGC CACGCCTTAT
CAAGCTGCCG GCCAGGTGTG GGACGAGCGC ATCGGCTCGC CGCGCGTGCA GGCGAAGAAC
TGGCGGCTGA TGGCCTTCGG CTGCCTGACG CTCGCGCTGC TGATGGCCGG CGGCCTGGTG
TGGCGCTCGG CGCAGTCCAT CGTGACGCCC TATGTGGTGG AGGTGGACAA CGCGGGCCAA
GTGCGCGCCG TGGGCGAAGC CGCCACGCCT TACCGGCCCA ACGATGCGCA GACGGCGCAC
CACATCGCGC GCTTCGTGAC GCTGGTGCGC TCGCTGTCCA TCGACCCCAT TGTCGTCCGC
CAGAACTGGC TGGACGCCTA CGACTACACC ACCGACAAGG GCGCCGTGGC GCTCAACGAC
TACGCCCGCG TGAACGATCC GTTCGCGCGC ATCGGCAAGG AGTCGGTGAC GGTGCAGATC
GCCAGCGTGA CCCGTGCCAG CGACACGTCT TTCAACGTGC GCTGGACGGA ACGGCGCTAC
GTCAACGGCG CTGCCGCAGG CACTGAACGC TGGAACGCCG TGATTTCCAT CGTGCAGCAG
ACCCCACGCA CCGAGGAACG CCTACGCAAG AACCCTCTCG GCATTTACGT CAATGGCCTG
TCGTGGAGCC GCGAACTGGA TTCTTCCGAA GGAGCAAAAC CATGA
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| Protein sequence | MRFKKPQVRY ADTPQAATPY QAAGQVWDER IGSPRVQAKN WRLMAFGCLT LALLMAGGLV
WRSAQSIVTP YVVEVDNAGQ VRAVGEAATP YRPNDAQTAH HIARFVTLVR SLSIDPIVVR
QNWLDAYDYT TDKGAVALND YARVNDPFAR IGKESVTVQI ASVTRASDTS FNVRWTERRY
VNGAAAGTER WNAVISIVQQ TPRTEERLRK NPLGIYVNGL SWSRELDSSE GAKP
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