| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1541 |
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| Symbol | |
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| ID | 4038344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1661889 |
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| End bp | 1663628 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637976925 |
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| Product | formyl transferase-like protein |
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| Protein accession | YP_583693 |
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| Protein GI | 94310483 |
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| COG category | [I] Lipid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase
[COG1024] Enoyl-CoA hydratase/carnithine racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00137712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.223229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATAC TCTTCCTCAC CCACAGCTTC AACAACCTCA CCCAGCGCCT CTACGTGGAA
CTCACCGGGC GCGGGCACGA GGTGTCCATC GAGTTCGACA TCGCCGACAG CGTGGCCGAG
GAGGCCGTCG CGCTGTTCCG GCCGGATCTC ATCGTGGCGC CCTATCTGCG CCGGGCGATA
CCCGAGTCCA TCTGGCGCCA GCACGTTTGC CTGGTGGTGC ATCCGGGCAT CGTCGGCGAT
CGCGGTCCCT CGGCGCTGGA CTGGACGATC CAGGAGGGTG TGGATGAGTG GGGCGTCACG
GTGCTGCAGG CCAACGGCGA GATGGATGCC GGCGACATCT GGGCCACCGA GACCTTTCCC
ATGTGCCTGG CGAAGAAGAG CAGCCTCTAC CGCAACGAGG TGACGGCGGC GGCGACCCGC
GCGGTGCTGG CGGCGGTCGG GCGCTACGCC GTGTATCGTT CCGGCGCATT CCGCCCGCGG
CCGCTGGACT ATGCGGATCC AAACGTGCGC GGCCGGCTGC GTCCGCTCAT GAAGCAGGAA
GACCGTAGCA TCGACTGGCA GCGCGAGAGC ACCGAGCAGG TGTTGCGCAA GCTCCACGCG
GCGGACGGTT TCCCCGGCGT GCGCGACGAA CTGTTCGGCG TGCCCTGTCA TCTCTTCGAC
GCCCATGCGG AGTACCGCCT GCGGGGCGAG CCGGGCGCGC TGCTGGGGCG GCGTGAGGGT
GCAGTGCTGC GCGCCACGGT GGATGGCGCG GTGTGGATCG GCCATGCGAA GCGCGCCGAC
CGCGATGATG CGCTGAAGCT GCCTGCCACC CTGGCCTTCG CCGAGGAGAC GAAGGATCTG
CCCGAGTACA CCGTGCCCCT GTGGCGCGAA GAGGAGGGAG ACTGGAGCCC GCTGCGCTAC
CATGAGGCCG GCGGCGTCGG CTACCTGCAT TTCGATTTCT ACAACGGCGC CATGGGCACG
ACGCAATGCC AGCGCCTGCT CGCCGCCTAC GAGTTCGCGC GCAGCCGGTC CACGAAGGTC
ATCGTGCTCC TGGGCGGTGC GGACTTCTGG TCCAACGGGA TCCACCTCAA TCTCATCGAG
GCGGCGGACA GCGCCGCCGA TGAGTCCTGG CGCAACATCA ACGCCATCGA CGACGTGGCC
CGTGCCGTCA TCGAGACCGG CGGCCAGCTC ACCGTCGCCG CGCTGCGCGG CAACGCCGGC
GCCGGCGGCG CCTTCCTGGC GCTGGCGGCG GACGAAGTGT GGGCGCGCGA GGCGGCGATC
CTCAACCCCC ACTACAAGAA CATGGGTAAC CTCTACGGCT CCGAGTACTG GACCTACCTG
CTGCCCAGGC GGGTGGGCAT GGCGCGCGCC CGCGCCATCA TGCAGAACCG CCTGCCCCTC
GGCGCCGCGG AAGCGGCGCG GGAAGGCGTG GTGGATGCCT GCCTGTCCGG CGACGTGGCG
GCCTTCACCG TGCAGGTGGT GGCCCGTGCC GAAGCGCTGG CCGCTGCGGT GGACCTGGCA
CAGCGGCTCG AGGAGAAGCG CGCGCGGCGC GTGCGCGACG AGGCCGTGAA GCCGCTGGCC
GCCTATCGCG ACGAAGAGCT GGAACACATG CGGCGCAACT TCTACGGCTT CGATCCCAGC
TATCACGTGG CGCGCTATCA TTTCGTGCGC CGCACGCCGC ACTCGTGGAC GCCGCGGCAT
CTGGCCGCAC ACCGCGACAT CGATTGGGGG ACAGGCCGCC TGAAGGCCGT GAAGCCATGA
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| Protein sequence | MRILFLTHSF NNLTQRLYVE LTGRGHEVSI EFDIADSVAE EAVALFRPDL IVAPYLRRAI
PESIWRQHVC LVVHPGIVGD RGPSALDWTI QEGVDEWGVT VLQANGEMDA GDIWATETFP
MCLAKKSSLY RNEVTAAATR AVLAAVGRYA VYRSGAFRPR PLDYADPNVR GRLRPLMKQE
DRSIDWQRES TEQVLRKLHA ADGFPGVRDE LFGVPCHLFD AHAEYRLRGE PGALLGRREG
AVLRATVDGA VWIGHAKRAD RDDALKLPAT LAFAEETKDL PEYTVPLWRE EEGDWSPLRY
HEAGGVGYLH FDFYNGAMGT TQCQRLLAAY EFARSRSTKV IVLLGGADFW SNGIHLNLIE
AADSAADESW RNINAIDDVA RAVIETGGQL TVAALRGNAG AGGAFLALAA DEVWAREAAI
LNPHYKNMGN LYGSEYWTYL LPRRVGMARA RAIMQNRLPL GAAEAAREGV VDACLSGDVA
AFTVQVVARA EALAAAVDLA QRLEEKRARR VRDEAVKPLA AYRDEELEHM RRNFYGFDPS
YHVARYHFVR RTPHSWTPRH LAAHRDIDWG TGRLKAVKP
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