| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1522 |
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| Symbol | |
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| ID | 4038325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1644017 |
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| End bp | 1645825 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637976906 |
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| Product | respiratory-chain NADH dehydrogenase domain-containing protein |
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| Protein accession | YP_583674 |
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| Protein GI | 94310464 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000148322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000569435 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAAAG ACATCCGGAC AATACTTGAG CGTTACCGCT CAGACAGAGC CCGTCTGATG
GACATACTTT GGGATGTTCA GCATCTGTAC GGGCACATTC CCGATGAGGT GCTGCCGCAA
CTAGCGGCCG AGTTGAACCT GTCCCCACTC GACATTCGGG AAACAGCGTC GTTCTACCAT
CTTTTCCATG ACAAACCGTC GGGAAAGCAT CGGATTTACC TGTGCAATTC CGTGATTGCC
AAGATGAACG GCTATCAGGC GGTGCACGAT GCCCTCGAGC GCGAGACTGG AGTCCGTTTC
GGCGAAACCG ACCCGAATGG AATGTTCGGC CTGTTCGAAA CGCCCTGTAT CGGACTCAGC
GATCAGGAGC CGGCGATGCT GATCGACAAG GTGGTATTCA CCCGCCTGAG GCCCGGAAAG
ATCGCAGACA TCATCGCCCA GCTGAAACAG GGGCGGTCCC CGGCCGAGAT CGCGAACCCG
GCCGGGTTGC CCAGCGACGA TATCGCCTAT GTCGATGCCC TGGTGGAATC CAATGTGCGC
ACGAAGGGGC CGGTATTCTT CCGTGGCAGG ACGGATTTCA AGGCCGTGCT CGACCACTGC
CTGACGCTCA GGCCCGAACA GGTGATCGAC GAGATCATCG AATCCAAGCT GCGCGGACGC
GGGGGCGCCG GGTTCACGAC CGGGCTGAAG TGGCAGCTTT GCCGGCGTGC TTTGAGCGAC
ACGAAGTACG TCATCTGCAA TGCCGACGAA GGCGAGCCCG GGACCTTCAA GGACAGGGCC
CTGCTGACAC GCTCGCCCAA GGAGGTATTC ATCGGAATGG CGATCGCCGC CCATGCCATC
GGCTGCCGCC ATGGCATCGT TTACCTCCGC GCGGAGTACT TTTATCTCAA GGATTATCTG
GAACGACAGC TTCAGCAGCT CAGGGATGAC GGGTTGCTGG GACGCGCTAT TGGCGTCCGG
CGGGACTTTG ATTTCGATAT CCGTATTCAG ATGGGGGCCG GCGCTTATAT CTGCGGTGAC
GAGTCGGCCC TCATCGAGTC CTGCGAGGGA AAACGCGGCA CGCCACGGGT GAAACCTCCC
TTTCCGGTGC AGCAGGGGTA TCTGGGAAAA CCCACCTGCG TCAACAACGT CGAGACCTTT
GCCGCCGTCT CCCGAATCAT GGAGGAAGGC GCCGACTGGT TCAGTGCGAT GGGAACGCCG
GACTCCGCCG GCACCCGACT GCTGAGTGTT GCCGGCGATT GCAGCAAGCC GGGGATCTAC
GAGGTGGAAT GGGGCGTGAC GCTCAACGAG GTACTGGCGA TGGTCGGAGC GAAGGAGGCG
CGGGCCGTTC AGATCAGCGG GCCCTCGGGT GAGTGCGTGT CGGTGGAGAA GGATGGCGAA
CGCAGGCTCG CGTACGAGGA TCTTTCCTGC AATGGTGCGT TCACGATCTT CAACCGGAAC
CGTGACCTGC TGGACATCGT CAAGGACTAC ATGCAGTTCT TCGTCGATGA GTCCTGCGGC
ATTTGCGTGC CGTGCCGGGC CGGCAACGTC GACCTGCACA GGAAGGTCGA ATGGGTGATC
GCCGGCAAGG CGTGCCAGAA GGATCTGGAC GACATGGTCA GTTGGGGAGC GCTGGTGCGC
AAGACCAGTC GATGTGGTCT TGGCGCCACC TCTCCCAAAC CCATCCTGAC GACGCTGGAG
AAGTTTCCCG AGATCTATCA GGACAAGCTG GTGAGGCACG AGGGCCCGCT GCTGCCGTCG
TTCGACCTCG ATACCGCCTT GGGCGGGCAT GAGAAGGCGC TGAAGGAACT GGAGGAGGCA
AAAAAATGA
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| Protein sequence | MSKDIRTILE RYRSDRARLM DILWDVQHLY GHIPDEVLPQ LAAELNLSPL DIRETASFYH
LFHDKPSGKH RIYLCNSVIA KMNGYQAVHD ALERETGVRF GETDPNGMFG LFETPCIGLS
DQEPAMLIDK VVFTRLRPGK IADIIAQLKQ GRSPAEIANP AGLPSDDIAY VDALVESNVR
TKGPVFFRGR TDFKAVLDHC LTLRPEQVID EIIESKLRGR GGAGFTTGLK WQLCRRALSD
TKYVICNADE GEPGTFKDRA LLTRSPKEVF IGMAIAAHAI GCRHGIVYLR AEYFYLKDYL
ERQLQQLRDD GLLGRAIGVR RDFDFDIRIQ MGAGAYICGD ESALIESCEG KRGTPRVKPP
FPVQQGYLGK PTCVNNVETF AAVSRIMEEG ADWFSAMGTP DSAGTRLLSV AGDCSKPGIY
EVEWGVTLNE VLAMVGAKEA RAVQISGPSG ECVSVEKDGE RRLAYEDLSC NGAFTIFNRN
RDLLDIVKDY MQFFVDESCG ICVPCRAGNV DLHRKVEWVI AGKACQKDLD DMVSWGALVR
KTSRCGLGAT SPKPILTTLE KFPEIYQDKL VRHEGPLLPS FDLDTALGGH EKALKELEEA
KK
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