Gene Rmet_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1518 
Symbol 
ID4038321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1639908 
End bp1640945 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content67% 
IMG OID637976902 
Productfructose-1,6-bisphosphate aldolase 
Protein accessionYP_583670 
Protein GI94310460 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000980725 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000076105 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCCTCA TCTCACTGCG CCAAGTGCTC GATCACGCTG CCGAATACGG CTACGGCGTG 
CCCGCTTTCA ATGTCAACAA CCTGGAGCAG GTCCACGCCA TCATGGAGGC GGCGCAGGAA
ACGCAGTCGC CGGTGATTTT GCAAGCCTCG GCCGGCGCCC GCAAGTATGC CGGCGAGCCC
TACCTGCGCC ACCTGGTGCT GGCGGCCGTG GAGATGCACC CCGACATCCC GGTCGTGCTG
CACCAGGACC ACGGCGCCTC GCCGGCGGTG TGCCAGCAGT CGATCCGCTC GGGCTTCACC
AGCGTGATGA TGGACGGCTC CCTGCTCGAA GACGCGAAGA CGCCCGCGAG CTACGATTAC
AACGTCGACG TCACGCGCAA GGTCTGCGAA ATGGCGCATT CAATCGGCGT CTCGGTCGAG
GGTGAACTGG GCTGCCTGGG TTCGCTCGAA ACGGGCGAGG CCGGCGAAGA AGACGGCGTC
GGTGCCGTGG GCAAGCTCAC GCACGACATG ATGCTCACCA ATCCCGAGGA GGCCAAGGAC
TTCGTGGCCC GCACTGGCGT GGATGCGCTG GCTATTGCCA TCGGCACCAG CCACGGCGCC
TACAAGTTCA CCCGCAAGCC CACCGGCGAC ATCCTGGCCA TCGAGCGCAT CGCGCAGATC
CACGCCGCGG TGCCGAACAC GCACCTGGTG ATGCACGGCT CCTCCAGTGT GCCGCAGGAG
TGGCTGGCGA TCATCCGCAA GTACGGCGGC GACATCAAGG AGACCTACGG CGTGCCGGTC
GAGGAGATCC AGCGCGGGAT CAAGAGCGGT GTGCGCAAGA TCAACATCGA TACCGACATC
CGCTTGGCGA TGACCGCGGC GATGCGCCAA GTGTTCGCCG AGCAGCCCAG CGAGTTCGAC
CCGCGCAAGG CGCTGCAGGC GGCCACTAAG GCCGCGCGCA GCGTGGTCAA GGCGCGCTTC
GAGGCCTTCG GCTGCGCCGG GCAGGGGGCC CGCATCAAGC CGCTCCCGCT CGAAGTCATG
GCGGCACGCT ACGCGTGA
 
Protein sequence
MALISLRQVL DHAAEYGYGV PAFNVNNLEQ VHAIMEAAQE TQSPVILQAS AGARKYAGEP 
YLRHLVLAAV EMHPDIPVVL HQDHGASPAV CQQSIRSGFT SVMMDGSLLE DAKTPASYDY
NVDVTRKVCE MAHSIGVSVE GELGCLGSLE TGEAGEEDGV GAVGKLTHDM MLTNPEEAKD
FVARTGVDAL AIAIGTSHGA YKFTRKPTGD ILAIERIAQI HAAVPNTHLV MHGSSSVPQE
WLAIIRKYGG DIKETYGVPV EEIQRGIKSG VRKINIDTDI RLAMTAAMRQ VFAEQPSEFD
PRKALQAATK AARSVVKARF EAFGCAGQGA RIKPLPLEVM AARYA